LOC_Os04g48310.1 (LOC_Os04g48310)


Aliases : LOC_Os04g48310

Description : RING-H2 finger protein ATL48 OS=Arabidopsis thaliana (sp|q7x843|atl48_arath : 82.0)


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g48310.1

Target Alias Description ECC score Gene Family Method Actions
AT4G30400 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g02176 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ala_g06598 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g04740 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Als_g07858 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Als_g15749 RHA3A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0163.g054250 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g31595 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g06659 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g08872 ATL2, TL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_184439g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Ore_g10559 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g045190.3.1 XERICO, Solyc07g045190 ubiquitin protein ligase (XERICO) 0.08 OrthoFinder output from all 47 species
Spa_g46679 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g34059 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g34854 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e016092_P001 Zm00001e016092 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 95 138
No external refs found!