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  5. LOC_Os04g49990.1

LOC_Os04g49990.1 (LOC_Os04g49990)


Aliases : LOC_Os04g49990

Description : AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana (sp|q8vyj2|ahl1_arath : 152.0)


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g49990.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00240090 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 14... 0.03 OrthoFinder output from all 47 species
Adi_g021113 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057354 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13523 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15731 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22194 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07653 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15602.t1 Aspi01Gene15602 AHL clade-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene63719.t1 Aspi01Gene63719 AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63974.t1 ATAHL1, AHL1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15805 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31583 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g70774 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G011500.1 ATAHL1, AHL1,... AHL clade-B transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g05626 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18260 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06946 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09055 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24172 ATAHL1, AHL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013200001 No alias AT-hook motif nuclear-localized protein 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_33643 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g13279 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13288 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16841 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06268 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10736 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11192 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20335 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09590 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12378 No alias AHL clade-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07470 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12001 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000827 No alias AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010139 No alias AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g07849 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo410086 No alias AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species
Solyc08g077030.4.1 Solyc08g077030 AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species
Tin_g04587 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002444_P001 Zm00001e002444 AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species
Zm00001e016260_P002 Zm00001e016260 AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e023546_P003 Zm00001e023546 AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 171 285
No external refs found!