LOC_Os04g51520.1 (XTR6, XTH23, LOC_Os04g51520)

Aliases : XTR6, XTH23, LOC_Os04g51520

Description : Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 300.4) & Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica (sp|q76bw5|xth8_orysj : 300.0)

Gene families : OG0000079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g51520.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00055p00213440	XTH3,...	Xyloglucan endotransglucosylase/hydrolase protein 3...	0.03	OrthoFinder output from all 47 species
Aev_g04717	XTR7, XTH15	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g07933	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g28165	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g03767	XTH13, AtXTH13	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene16072.t1	XTH6, Aspi01Gene16072	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene18629.t1	XTH5, EXGT-A4,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene18630.t1	XTH5, EXGT-A4,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g33284	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01003280001	XTH1	Putative xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species
GSVIVT01029172001	XTR3, XTH25	Probable xyloglucan endotransglucosylase/hydrolase...	0.05	OrthoFinder output from all 47 species
GSVIVT01031601001	XTH16	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max	0.03	OrthoFinder output from all 47 species
Gb_10644	XTH6	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
Gb_25347	XTR7, XTH15	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	OrthoFinder output from all 47 species
Gb_39598	XTR6, XTH23	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	OrthoFinder output from all 47 species
LOC_Os02g17880.1	XTH26, ATXTH26,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
LOC_Os06g22919.1	XTH26, ATXTH26,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species
MA_10434153g0010	XTH5, EXGT-A4	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
MA_275059g0010	XTH26, ATXTH26	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
MA_476450g0010	XTH6	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
MA_519314g0010	XTH5, EXGT-A4	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
MA_7132g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g10120	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g099630.4.1	XTH5, EXGT-A4,...	Probable xyloglucan endotransglucosylase/hydrolase 1...	0.02	OrthoFinder output from all 47 species
Solyc12g007250.1.1	XTH26, ATXTH26,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species
Solyc12g007260.2.1	XTH26, ATXTH26,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
Solyc12g007270.3.1	XTH26, ATXTH26,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
Zm00001e007027_P003	XTH16, Zm00001e007027	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species
Zm00001e022301_P001	XTR3, XTH25,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
Zm00001e040081_P001	TCH4, XTH22,...	Xyloglucan endotransglycosylase/hydrolase protein 8...	0.02	OrthoFinder output from all 47 species
Zm00001e041590_P001	XTH16, Zm00001e041590	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004568	chitinase activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
BP	GO:0006022	aminoglycan metabolic process	IEP	HCCA
BP	GO:0006026	aminoglycan catabolic process	IEP	HCCA
BP	GO:0006030	chitin metabolic process	IEP	HCCA
BP	GO:0006032	chitin catabolic process	IEP	HCCA
BP	GO:0006040	amino sugar metabolic process	IEP	HCCA
MF	GO:0008061	chitin binding	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0046348	amino sugar catabolic process	IEP	HCCA
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	HCCA
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010713	XET_C	269	311
IPR000757	GH16	37	221

External Links

No external refs found!

LOC_Os04g51520.1 (XTR6, XTH23, LOC_Os04g51520)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation