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  5. LOC_Os04g52250.1

LOC_Os04g52250.1 (LOC_Os04g52250)


Aliases : LOC_Os04g52250

Description : no hits & (original description: none)


Gene families : OG0000520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g52250.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00153720 evm_27.TU.AmTr_v1... 36.4 kDa proline-rich protein OS=Solanum lycopersicum 0.04 OrthoFinder output from all 47 species
AMTR_s01045p00008470 evm_27.TU.AmTr_v1... 14 kDa proline-rich protein DC2.15 OS=Daucus carota 0.03 OrthoFinder output from all 47 species
AT1G62510 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT4G00165 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
Aspi01Gene18975.t2 Aspi01Gene18975 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18976.t1 Aspi01Gene18976 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18978.t1 Aspi01Gene18978 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18979.t1 Aspi01Gene18979 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18984.t1 Aspi01Gene18984 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18985.t1 Aspi01Gene18985 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18987.t1 Aspi01Gene18987 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18988.t1 Aspi01Gene18988 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47933.t1 Aspi01Gene47933 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47934.t1 Aspi01Gene47934 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08778 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23033 AIR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027641001 No alias Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g01300.1 AZI1, LOC_Os03g01300 Cortical cell-delineating protein OS=Zea mays... 0.04 OrthoFinder output from all 47 species
LOC_Os06g01580.1 LOC_Os06g01580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g12357 AZI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_214375g0010 No alias 36.4 kDa proline-rich protein OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
MA_370739g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g63005 AIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g083990.1.1 Solyc03g083990 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 OrthoFinder output from all 47 species
Solyc03g083995.1.1 Solyc03g083995 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 OrthoFinder output from all 47 species
Solyc03g083998.1.1 ELP, Solyc03g083998 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.04 OrthoFinder output from all 47 species
Solyc03g090990.1.1 Solyc03g090990 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g078890.3.1 Solyc08g078890 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g078900.1.1 Solyc08g078900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041513_P001 Zm00001e041513 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR027923 Hydrophob_seed_dom 111 195
No external refs found!