1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g52340.1

LOC_Os04g52340.1 (LOC_Os04g52340)


Aliases : LOC_Os04g52340

Description : no hits & (original description: none)


Gene families : OG0003567 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003567_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g52340.1

Target Alias Description ECC score Gene Family Method Actions
Ceric.04G032500.1 Ceric.04G032500 component *(NOT9) of mRNA deadenylation CCR4-NOT complex... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001264.17 No alias No description available 0.01 OrthoFinder output from all 47 species
Pnu_g24159 No alias component *(NOT9) of mRNA deadenylation CCR4-NOT complex... 0.02 OrthoFinder output from all 47 species
Zm00001e006956_P002 Zm00001e006956 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034508 centromere complex assembly IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!