LOC_Os04g52900.1 (AtABCC2, ABCC2,...)

Aliases : AtABCC2, ABCC2, ATMRP2, EST4, MRP2, LOC_Os04g52900

Description : subfamily ABCC transporter

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g52900.1
Cluster	HCCA: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00092p00037330	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT1G30420	ATMRP12, MRP12, ABCC11	multidrug resistance-associated protein 12	0.05	OrthoFinder output from all 47 species
Adi_g011351	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g109478	ATABCC5, MRP5,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g15090	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g33144	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g42161	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g07150	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g10954	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g07445	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g22920	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g09037	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g20294	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g62145	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64347.t1	Aspi01Gene64347	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g02741	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g04097	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g19912	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.1Z013100.1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description:...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020723.5	MRP11, ABCC13, ATMRP11	ABC transporter C family member 13 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cre04.g228650	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Cre08.g369720	ABCC12, MRP13, ATMRP13	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Cre13.g564900	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Dac_g05478	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g18227	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g36989	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g40707	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g44715	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g45492	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g46040	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021590001	ABCC12, MRP13, ATMRP13	ABC transporter C family member 12 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01021594001	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01037976001	ABCC3, ATMRP3, MRP3	ABC transporter C family member 3 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_36600	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Gb_37462	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Len_g22379	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10426119g0010	AtABCC2, ABCC2,...	ABC transporter C family member 2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Msp_g10903	ATMRP12, MRP12, ABCC11	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g14759	MRP9, ABCC9, ATMRP9	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g08952	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15840	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g35210	ATMRP14, ABCC10, MRP14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g58277	ABCC12, MRP13, ATMRP13	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g06508	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003781	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: CDS=314-4942	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017297	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: CDS=111-3830	0.03	OrthoFinder output from all 47 species
Smo144775	ATABCC5, MRP5,...	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
Smo163776	ATABCC5, MRP5,...	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
Smo402326	ATABCC5, MRP5,...	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
Smo81581	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc07g065320.4.1	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Solyc08g006880.3.1	AtABCC2, ABCC2,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Solyc09g075020.3.1	EST3, MRP4,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Solyc12g036120.1.1	ABCC12, MRP13,...	ABC transporter C family member 12 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc12g036160.3.1	AtABCC2, ABCC2,...	ABC transporter C family member 2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Tin_g10300	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e026288_P002	MRP10, ATMRP10,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Zm00001e038918_P002	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
BP	GO:0006848	pyruvate transport	IEP	HCCA
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015718	monocarboxylic acid transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:1901475	pyruvate transmembrane transport	IEP	HCCA
BP	GO:1903825	organic acid transmembrane transport	IEP	HCCA
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	HCCA
BP	GO:1990542	mitochondrial transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	926	1171
IPR011527	ABC1_TM_dom	305	572
IPR003439	ABC_transporter-like_ATP-bd	634	771
IPR003439	ABC_transporter-like_ATP-bd	1262	1410

External Links

No external refs found!

LOC_Os04g52900.1 (AtABCC2, ABCC2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation