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  5. LOC_Os04g54940.1

LOC_Os04g54940.1 (EB1A, ATEB1H2,...)


Aliases : EB1A, ATEB1H2, ATEB1A, LOC_Os04g54940

Description : microtubule plus-end-tracking protein (EB1). MT plus-end-tracking protein (EB1)


Gene families : OG0000923 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000923_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g54940.1

Target Alias Description ECC score Gene Family Method Actions
Als_g13829 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.02 OrthoFinder output from all 47 species
Als_g16075 ATEB1, EB1B, ATEB1B microtubule plus-end-tracking protein *(EB1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.36G021800.1 EB1C, ATEB1C,... microtubule plus-end-tracking protein *(EB1) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001206.14 EB1C, ATEB1C, ATEB1H1 Cell cycle.cytokinesis.phragmoplast microtubule... 0.02 OrthoFinder output from all 47 species
Len_g02197 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.02 OrthoFinder output from all 47 species
Len_g50826 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g14430 No alias microtubule plus-end-tracking protein *(EB1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g30075 No alias microtubule plus-end-tracking protein *(EB1) & original... 0.03 OrthoFinder output from all 47 species
Spa_g04207 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.03 OrthoFinder output from all 47 species
Spa_g10579 EB1A, ATEB1H2, ATEB1A microtubule plus-end-tracking protein *(EB1) & original... 0.02 OrthoFinder output from all 47 species
Spa_g52546 EB1C, ATEB1C, ATEB1H1 microtubule plus-end-tracking protein *(EB1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e004464_P002 EB1C, ATEB1C,... microtubule plus-end-tracking protein (EB1). MT... 0.02 OrthoFinder output from all 47 species
Zm00001e006785_P005 EB1A, ATEB1H2,... microtubule plus-end-tracking protein (EB1). MT... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008017 microtubule binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR004953 EB1_C 206 243
IPR001715 CH_dom 22 119
No external refs found!