LOC_Os04g55920.1 (JAZ12, TIFY3B, LOC_Os04g55920)


Aliases : JAZ12, TIFY3B, LOC_Os04g55920

Description : transcription factor (TIFY)


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g55920.1

Target Alias Description ECC score Gene Family Method Actions
AT1G17380 TIFY11A, JAZ5 jasmonate-zim-domain protein 5 0.04 OrthoFinder output from all 47 species
AT1G70700 JAZ9, TIFY7 TIFY domain/Divergent CCT motif family protein 0.03 OrthoFinder output from all 47 species
AT1G72450 TIFY11B, JAZ6 jasmonate-zim-domain protein 6 0.04 OrthoFinder output from all 47 species
AT5G20900 JAZ12, TIFY3B jasmonate-zim-domain protein 12 0.03 OrthoFinder output from all 47 species
Aev_g12202 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g39391 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14552 JAI3, JAZ3, TIFY6B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27866 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g43326 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52890 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61987 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20519 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03753 JAZ9, TIFY7 TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g64521 TIFY11A, JAZ5 TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10901.t1 JAI3, JAZ3,... TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10902.t1 JAI3, JAZ3,... TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10903.t1 JAI3, JAZ3,... TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10904.t1 JAZ9, TIFY7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21001.t1 PPD2, TIFY4B,... TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26915.t1 Aspi01Gene26915 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27112.t1 TIFY10B, JAZ2,... TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27117.t1 JAI3, JAZ3,... TIFY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27118.t1 JAI3, JAZ3,... TIFY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27119.t1 JAZ4, TIFY6A,... TIFY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27120.t1 JAZ4, TIFY6A,... TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11553 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27587 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G092200.1 TIFY10B, JAZ2,... TIFY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.01G092300.1 JAZ9, TIFY7,... not classified & original description: pacid=50591690... 0.02 OrthoFinder output from all 47 species
Ceric.01G114200.1 JAI3, JAZ3,... TIFY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.07G033300.1 JAZ9, TIFY7,... TIFY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.07G034500.1 Ceric.07G034500 not classified & original description: pacid=50626124... 0.03 OrthoFinder output from all 47 species
Ceric.07G034600.1 Ceric.07G034600 not classified & original description: pacid=50626654... 0.02 OrthoFinder output from all 47 species
Ceric.07G034800.1 JAI3, JAZ3,... TIFY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.07G034900.1 JAI3, JAZ3,... TIFY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.07G035100.1 JAZ9, TIFY7,... not classified & original description: pacid=50626896... 0.03 OrthoFinder output from all 47 species
Ceric.07G035200.1 JAI3, JAZ3,... not classified & original description: pacid=50628021... 0.03 OrthoFinder output from all 47 species
Ceric.07G035300.1 Ceric.07G035300 not classified & original description: pacid=50627474... 0.02 OrthoFinder output from all 47 species
Ceric.07G035400.1 PPD2, TIFY4B,... not classified & original description: pacid=50628108... 0.03 OrthoFinder output from all 47 species
Ceric.07G035500.1 JAZ9, TIFY7,... not classified & original description: pacid=50625982... 0.04 OrthoFinder output from all 47 species
Ceric.07G035700.1 JAZ9, TIFY7,... TIFY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.22G056300.1 JAZ12, TIFY3B,... TIFY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G056200.1 Ceric.38G056200 not classified & original description: pacid=50580277... 0.03 OrthoFinder output from all 47 species
Dac_g39220 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13636 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g00208 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02027 JAZ9, TIFY7 TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02892 PPD2, TIFY4B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07502 TIFY10B, JAZ2 TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26835 TIFY10A, JAZ1 TIFY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015042001 TIFY10A, JAZ1 RNA biosynthesis.transcriptional activation.TIFY... 0.04 OrthoFinder output from all 47 species
GSVIVT01023256001 JAZ12, TIFY3B RNA biosynthesis.transcriptional activation.TIFY... 0.05 OrthoFinder output from all 47 species
Gb_05280 JAS1, JAZ10, TIFY9 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_05282 TIFY10A, JAZ1 transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
Gb_19069 TIFY10B, JAZ2 transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
Gb_24133 JAI3, JAZ3, TIFY6B transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
Gb_38099 JAI3, JAZ3, TIFY6B transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08330.1 TIFY10A, JAZ1,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Lfl_g28310 JAI3, JAZ3, TIFY6B not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10229741g0010 TIFY10A, JAZ1 transcription factor (TIFY) 0.05 OrthoFinder output from all 47 species
MA_10426545g0010 JAZ11, TIFY3A transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
MA_10426545g0020 TIFY10B, JAZ2 transcription factor (TIFY) 0.05 OrthoFinder output from all 47 species
MA_19887g0010 JAZ4, TIFY6A transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_469601g0010 JAZ12, TIFY3B transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
MA_6326g0010 JAI3, JAZ3, TIFY6B transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
MA_68496g0010 TIFY10B, JAZ2 transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_8355655g0010 JAZ12, TIFY3B transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
MA_8757791g0010 TIFY10A, JAZ1 transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
Mp6g06230.1 JAI3, JAZ3, TIFY6B transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Msp_g47227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36257 No alias TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43497 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03188 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16393 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24908 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33694 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65131 TIFY10B, JAZ2 TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06060 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014943 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g09263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g005440.4.1 JAI3, JAZ3,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Solyc03g122190.3.1 TIFY10B, JAZ2,... transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
Solyc07g042170.3.1 TIFY10B, JAZ2,... component JAZ of jasmonic acid receptor complex.... 0.04 OrthoFinder output from all 47 species
Solyc12g009220.2.1 TIFY10A, JAZ1,... component JAZ of jasmonic acid receptor complex.... 0.06 OrthoFinder output from all 47 species
Solyc12g049400.2.1 TIFY10A, JAZ1,... component JAZ of jasmonic acid receptor complex.... 0.05 OrthoFinder output from all 47 species
Spa_g25016 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52270 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03098 JAZ9, TIFY7 TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23548 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24634 No alias TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27344 JAZ9, TIFY7 TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28226 JAZ4, TIFY6A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000588_P001 Zm00001e000588 transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
Zm00001e000589_P001 TIFY10A, JAZ1,... transcription factor (TIFY) 0.05 OrthoFinder output from all 47 species
Zm00001e000590_P001 TIFY10A, JAZ1,... transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
Zm00001e001934_P001 TIFY10A, JAZ1,... component JAZ of jasmonic acid receptor complex.... 0.03 OrthoFinder output from all 47 species
Zm00001e004862_P001 JAZ11, TIFY3A,... transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
Zm00001e006083_P001 TIFY10B, JAZ2,... no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e009884_P001 TIFY11A, JAZ5,... Protein TIFY 10c OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e012855_P001 TIFY10B, JAZ2,... transcription factor (TIFY) 0.04 OrthoFinder output from all 47 species
Zm00001e012856_P001 JAZ11, TIFY3A,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Zm00001e034256_P001 TIFY10B, JAZ2,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Zm00001e035549_P001 TIFY10B, JAZ2,... component JAZ of jasmonic acid receptor complex.... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR010399 Tify_dom 68 101
IPR018467 CCT_CS 170 195
No external refs found!