LOC_Os04g56720.1 (LOC_Os04g56720)


Aliases : LOC_Os04g56720

Description : Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana (sp|q9fn03|uvr8_arath : 108.0)


Gene families : OG0004526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004526_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g56720.1

Target Alias Description ECC score Gene Family Method Actions
Als_g14897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013321 No alias not classified & original description: CDS=250-1647 0.04 OrthoFinder output from all 47 species
Ceric.1Z205300.1 Ceric.1Z205300 not classified & original description: pacid=50613664... 0.04 OrthoFinder output from all 47 species
Dde_g23120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009847001 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g20431 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10358489g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g11968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g081200.3.1 Solyc04g081200 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041860_P003 Zm00001e041860 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 259 310
IPR000408 Reg_chr_condens 88 137
IPR000408 Reg_chr_condens 140 186
IPR000408 Reg_chr_condens 364 410
IPR000408 Reg_chr_condens 197 256
No external refs found!