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  5. LOC_Os04g57200.1

LOC_Os04g57200.1 (LOC_Os04g57200)


Aliases : LOC_Os04g57200

Description : no hits & (original description: none)


Gene families : OG0001602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g57200.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00240310 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 39... 0.03 OrthoFinder output from all 47 species
AT1G30473 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G05920 No alias Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G26690 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
Aob_g24315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019413001 No alias Heavy metal-associated isoprenylated plant protein 39... 0.03 OrthoFinder output from all 47 species
GSVIVT01028844001 No alias Heavy metal-associated isoprenylated plant protein 39... 0.09 OrthoFinder output from all 47 species
GSVIVT01028846001 No alias Heavy metal-associated isoprenylated plant protein 39... 0.06 OrthoFinder output from all 47 species
Gb_25183 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_34631 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_35035 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_38465 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_38912 No alias Heavy metal-associated isoprenylated plant protein 39... 0.04 OrthoFinder output from all 47 species
Lfl_g22315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25053 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10435010g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_14611g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_20255g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_33140g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_38463g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_43035g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7901881g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8368223g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8793793g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Pir_g28033 ATACA10, CIF1, ACA10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28834 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc03g007870.3.1 Solyc03g007870 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Solyc06g036310.3.1 Solyc06g036310 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e000191_P001 Zm00001e000191 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e006611_P002 Zm00001e006611 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020167_P001 Zm00001e020167 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041878_P001 Zm00001e041878 Heavy metal-associated isoprenylated plant protein 39... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 11 60
No external refs found!