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  5. LOC_Os04g58190.1

LOC_Os04g58190.1 (LOC_Os04g58190)


Aliases : LOC_Os04g58190

Description : transcription factor (DOF)


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g58190.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00264070 CDF3,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00153440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AMTR_s00059p00213350 ADOF1, DOF1,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00119p00099150 CDF2,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00160p00038440 HCA2, DOF5.6,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT1G21340 No alias Dof-type zinc finger DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT1G29160 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT2G28510 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.09 OrthoFinder output from all 47 species
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.01 OrthoFinder output from all 47 species
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT3G50410 OBP1 OBF binding protein 1 0.04 OrthoFinder output from all 47 species
AT3G61850 DAG1 Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.04 OrthoFinder output from all 47 species
AT5G60850 OBP4 OBF binding protein 4 0.01 OrthoFinder output from all 47 species
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.04 OrthoFinder output from all 47 species
Adi_g002851 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007394 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g008551 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012792 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016287 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022623 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056971 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077026 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078152 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078316 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078561 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079282 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081944 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086178 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086972 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099259 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113482 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113667 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04622 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08042 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16804 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01538 OBP3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03761 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16400 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38452 OBP4 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g01888 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04849 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20563 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27376 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51755 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04142 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18876 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18633 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30375.t1 OBP4, Aspi01Gene30375 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene43236.t1 TMO6, Aspi01Gene43236 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44459.t1 Aspi01Gene44459 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47016.t1 CDF2, Aspi01Gene47016 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53704.t1 ADOF1, DOF1,... transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68681.t1 OBP4, Aspi01Gene68681 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008799 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1614 0.02 OrthoFinder output from all 47 species
Azfi_s1074.g096912 TMO6 transcription factor *(DOF) & original description: CDS=1-1176 0.03 OrthoFinder output from all 47 species
Cba_g05790 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26303 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G083700.1 OBP4, Ceric.14G083700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G020200.1 CDF1, Ceric.20G020200 transcription factor *(DOF) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.22G032900.1 TMO6, Ceric.22G032900 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g40320 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06183 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07633 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08133 CDF3 transcription factor *(DOF) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g19391 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25853 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12302 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16037 ADOF2, DOF2 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18747 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25269 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007992001 CDF1 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
GSVIVT01011138001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
GSVIVT01016538001 OBP3 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01016887001 ADOF1, DOF1 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
GSVIVT01027184001 DAG1 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Gb_07805 No alias transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Gb_20144 HCA2, DOF5.6 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os01g15900.1 CDF2, LOC_Os01g15900 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os07g13260.1 OBP3, LOC_Os07g13260 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
LOC_Os08g38220.1 LOC_Os08g38220 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os10g26620.1 CDF1, LOC_Os10g26620 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Len_g10091 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10876 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13353 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14959 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15959 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56635 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04824 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23147 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26281 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30870 HCA2, DOF5.6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
MA_16692g0010 TMO6 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
MA_18267g0010 HCA2, DOF5.6 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
MA_2430g0010 CDF3 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_56828g0010 No alias transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Mp1g18540.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g20790.1 TMO6 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19321 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05845 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05846 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06748 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17212 OBP3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32243 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41458 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41543 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01905 DOF2.4, ATDOF2.4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52876 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18788 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26540 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09266 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31297 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32547 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43089 CDF2 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53347 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53532 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61765 DAG1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007584 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1335 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1128 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012351 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1632 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012870 TMO6 transcription factor *(DOF) & original description: CDS=1-1464 0.04 OrthoFinder output from all 47 species
Sam_g18123 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24081 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g43145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g076850.2.1 Solyc02g076850 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc02g078620.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc02g090310.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.01 OrthoFinder output from all 47 species
Solyc03g112930.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc03g115940.4.1 CDF3, Solyc03g115940 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc03g121400.1.1 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc05g054510.2.1 OBP3, Solyc05g054510 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc06g071480.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc06g076030.3.1 Solyc06g076030 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Solyc08g082910.2.1 Solyc08g082910 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc10g086440.2.1 DOF2.4,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Spa_g31006 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14068 OBP3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20763 CDF3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000526_P001 CDF3, Zm00001e000526 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e001988_P001 TMO6, Zm00001e001988 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e003414_P001 OBP1, Zm00001e003414 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e004476_P002 Zm00001e004476 transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Zm00001e004809_P001 CDF3, Zm00001e004809 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e005785_P001 ADOF2, DOF2,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e006190_P001 Zm00001e006190 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e007228_P002 Zm00001e007228 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e009303_P001 TMO6, Zm00001e009303 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e012824_P001 CDF1, Zm00001e012824 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e015414_P004 Zm00001e015414 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Zm00001e015597_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e020190_P001 Zm00001e020190 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e027634_P002 OBP3, Zm00001e027634 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e028672_P001 Zm00001e028672 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e029641_P001 OBP3, Zm00001e029641 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e031750_P001 Zm00001e031750 transcription factor (DOF) 0.06 OrthoFinder output from all 47 species
Zm00001e035074_P001 TMO6, Zm00001e035074 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e041944_P001 Zm00001e041944 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 47 100
No external refs found!