LOC_Os04g59020.1 (LOC_Os04g59020)

Aliases : LOC_Os04g59020

Description : iron cation transporter (VTL)

Gene families : OG0003909 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003909_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g59020.1
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
AT1G76800	No alias	Vacuolar iron transporter (VIT) family protein	0.06	OrthoFinder output from all 47 species
Dde_g47894	No alias	iron cation transporter *(VTL) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01026421001	No alias	Solute transport.carrier-mediated transport.VIT...	0.02	OrthoFinder output from all 47 species
GSVIVT01034896001	No alias	Solute transport.carrier-mediated transport.VIT...	0.06	OrthoFinder output from all 47 species
Gb_38558	No alias	iron cation transporter (VTL)	0.05	OrthoFinder output from all 47 species
Len_g49458	No alias	iron cation transporter *(VTL) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g104800.2.1	Solyc01g104800	iron cation transporter (VTL)	0.03	OrthoFinder output from all 47 species
Solyc01g104810.2.1	Solyc01g104810	iron cation transporter (VTL)	0.02	OrthoFinder output from all 47 species
Solyc01g104820.4.1	Solyc01g104820	iron cation transporter (VTL)	0.02	OrthoFinder output from all 47 species
Zm00001e007400_P001	Zm00001e007400	iron cation transporter (VTL)	0.02	OrthoFinder output from all 47 species
Zm00001e007464_P001	Zm00001e007464	iron cation transporter (VTL)	0.02	OrthoFinder output from all 47 species
Zm00001e041992_P001	Zm00001e041992	iron cation transporter (VTL)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005384	manganese ion transmembrane transporter activity	IEA	Interproscan
BP	GO:0006873	cellular monoatomic ion homeostasis	None	Extended
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030003	cellular monoatomic cation homeostasis	None	Extended
BP	GO:0030026	cellular manganese ion homeostasis	IEA	Interproscan
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
MF	GO:0046915	transition metal ion transmembrane transporter activity	None	Extended
BP	GO:0046916	cellular transition metal ion homeostasis	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055071	manganese ion homeostasis	None	Extended
BP	GO:0055076	transition metal ion homeostasis	None	Extended
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0010333	terpene synthase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008217	Ccc1_fam	38	106
IPR008217	Ccc1_fam	114	199

External Links

No external refs found!

LOC_Os04g59020.1 (LOC_Os04g59020)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation