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  5. LOC_Os05g07120.1

LOC_Os05g07120.1 (LOC_Os05g07120)


Aliases : LOC_Os05g07120

Description : transcription factor (bHLH)


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g07120.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00150740 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G68810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G40200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT2G41130 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G25710 BHLH32, ATAIG1, TMO5 basic helix-loop-helix 32 0.03 OrthoFinder output from all 47 species
Als_g38947 BHLH32, ATAIG1, TMO5 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36805 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06352.t1 Aspi01Gene06352 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0043.g026970 BHLH32, ATAIG1, TMO5 bHLH-type transcription factor & original description: CDS=50-919 0.02 OrthoFinder output from all 47 species
Cba_g09602 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29521 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03913 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g37290.1 BHLH32, ATAIG1,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g05533 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21895 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47424 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11796 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51509 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g076920.3.1 Solyc02g076920 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e001119_P001 Zm00001e001119 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e006132_P001 Zm00001e006132 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e009812_P001 Zm00001e009812 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e016455_P001 BHLH32, ATAIG1,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e022445_P001 Zm00001e022445 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e034395_P001 Zm00001e034395 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e038535_P001 Zm00001e038535 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 70 115
No external refs found!