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  5. LOC_Os05g13380.1

LOC_Os05g13380.1 (LOC_Os05g13380)


Aliases : LOC_Os05g13380

Description : no hits & (original description: none)


Gene families : OG0005895 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005895_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g13380.1
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g31542.1 LOC_Os03g31542 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g25930.1 LOC_Os06g25930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g30050.1 LOC_Os08g30050 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g21470.1 LOC_Os12g21470 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 82 171
No external refs found!