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  5. LOC_Os05g13970.1

LOC_Os05g13970.1 (LOC_Os05g13970)


Aliases : LOC_Os05g13970

Description : Bark storage protein A OS=Populus deltoides (sp|q07469|bspa_popde : 102.0)


Gene families : OG0002104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002104_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g13970.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00104440 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G24340 No alias Phosphorylase superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G24350 No alias Phosphorylase superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G28940 No alias Phosphorylase superfamily protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene41703.t1 Aspi01Gene41703 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0756.g085482 No alias not classified & original description: CDS=80-1153 0.02 OrthoFinder output from all 47 species
Azfi_s1035.g095889 No alias not classified & original description: CDS=82-1119 0.02 OrthoFinder output from all 47 species
Cba_g14092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G002800.1 Ceric.07G002800 not classified & original description: pacid=50628008... 0.03 OrthoFinder output from all 47 species
Dcu_g20365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035644001 No alias Bark storage protein A OS=Populus deltoides 0.03 OrthoFinder output from all 47 species
Gb_35477 No alias Bark storage protein A OS=Populus deltoides... 0.04 OrthoFinder output from all 47 species
Gb_35482 No alias Bark storage protein B OS=Populus deltoides... 0.02 OrthoFinder output from all 47 species
LOC_Os01g12940.1 LOC_Os01g12940 Bark storage protein A OS=Populus deltoides... 0.05 OrthoFinder output from all 47 species
LOC_Os06g02210.1 LOC_Os06g02210 Bark storage protein A OS=Populus deltoides... 0.04 OrthoFinder output from all 47 species
Lfl_g27634 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g39307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_6189150g0010 No alias Bark storage protein A OS=Populus deltoides... 0.01 OrthoFinder output from all 47 species
Pir_g19666 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012115 No alias not classified & original description: CDS=412-1434 0.04 OrthoFinder output from all 47 species
Sam_g29010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g066900.1.1 Solyc08g066900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g007730.2.1 Solyc11g007730 Bark storage protein A OS=Populus deltoides... 0.01 OrthoFinder output from all 47 species
Spa_g10267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e036682_P001 Zm00001e036682 Bark storage protein B OS=Populus deltoides... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0009116 nucleoside metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000845 Nucleoside_phosphorylase_d 54 356
No external refs found!