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  5. LOC_Os05g16290.1

LOC_Os05g16290.1 (YSL7, LOC_Os05g16290)


Aliases : YSL7, LOC_Os05g16290

Description : iron chelator transporter (YSL). ferric cation-chelator transporter (YSL)


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g16290.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00228960 YSL6,... Nutrient uptake.iron uptake.chelation-based strategy... 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00229620 YSL6,... Nutrient uptake.iron uptake.chelation-based strategy... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00088380 YSL7,... Probable metal-nicotianamine transporter YSL5... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00088690 YSL7,... Solute transport.carrier-mediated transport.OPT... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00090040 YSL7,... Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00090440 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.05 OrthoFinder output from all 47 species
AT5G53550 ATYSL3, YSL3 YELLOW STRIPE like 3 0.04 OrthoFinder output from all 47 species
Adi_g023430 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene52239.t1 YSL7, Aspi01Gene52239 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene52240.t1 YSL7, Aspi01Gene52240 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Cba_g59417 YSL6 iron chelator transporter *(YSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G052800.1 YSL6, Ceric.34G052800 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Dac_g37280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012035001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.03 OrthoFinder output from all 47 species
GSVIVT01019645001 ATYSL1, YSL1 Nutrient uptake.iron uptake.chelation-based strategy... 0.02 OrthoFinder output from all 47 species
GSVIVT01029349001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.02 OrthoFinder output from all 47 species
Gb_41263 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
LOC_Os01g13710.1 YSL7, LOC_Os01g13710 iron chelator transporter (YSL). ferric cation-chelator... 0.05 OrthoFinder output from all 47 species
LOC_Os02g02450.1 YSL8, LOC_Os02g02450 iron chelator transporter (YSL). ferric cation-chelator... 0.05 OrthoFinder output from all 47 species
Sam_g04127 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc03g031920.3.1 YSL7, Solyc03g031920 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Solyc08g083060.3.1 ATYSL1, YSL1,... iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e007543_P002 YSL7, Zm00001e007543 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e007544_P001 YSL7, Zm00001e007544 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Zm00001e023053_P001 YSL7, Zm00001e023053 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Zm00001e025365_P001 YSL7, Zm00001e025365 iron chelator transporter (YSL). ferric cation-chelator... 0.08 OrthoFinder output from all 47 species
Zm00001e025368_P001 YSL7, Zm00001e025368 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e026899_P002 YSL7, Zm00001e026899 iron chelator transporter (YSL). ferric cation-chelator... 0.11 OrthoFinder output from all 47 species
Zm00001e026901_P002 YSL7, Zm00001e026901 iron chelator transporter (YSL). ferric cation-chelator... 0.14 OrthoFinder output from all 47 species
Zm00001e028817_P001 YSL7, Zm00001e028817 iron chelator transporter (YSL). ferric cation-chelator... 0.15 OrthoFinder output from all 47 species
Zm00001e041267_P001 YSL7, Zm00001e041267 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006021 inositol biosynthetic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 29 649
No external refs found!