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  5. LOC_Os05g22724.1

LOC_Os05g22724.1 (LOC_Os05g22724)


Aliases : LOC_Os05g22724

Description : 50S ribosomal protein L16, chloroplastic OS=Oryza nivara (sp|q6end6|rk16_oryni : 216.0)


Gene families : OG0004825 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004825_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os05g22724.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s02809p00000680 evm_27.TU.AmTr_v1... 50S ribosomal protein L16, chloroplastic OS=Amborella trichopoda 0.03 OrthoFinder output from all 47 species
Ceric.29G004300.1 RPL16, Ceric.29G004300 not classified & original description: pacid=50624823... 0.02 OrthoFinder output from all 47 species
Gb_40955 RPL16 50S ribosomal protein L16, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os01g57958.1 LOC_Os01g57958 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... 0.08 OrthoFinder output from all 47 species
LOC_Os04g16826.1 LOC_Os04g16826 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... 0.08 OrthoFinder output from all 47 species
LOC_Os10g21344.1 LOC_Os10g21344 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... 0.08 OrthoFinder output from all 47 species
Ore_g00369 RPL16 component *(uL16c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Solyc00g500032.1.1 RPL16, Solyc00g500032 50S ribosomal protein L16, chloroplastic OS=Atropa... 0.1 OrthoFinder output from all 47 species
Solyc00g500077.1.1 RPL16, Solyc00g500077 50S ribosomal protein L16, chloroplastic OS=Atropa... 0.1 OrthoFinder output from all 47 species
Solyc06g008140.1.1 RPL16, Solyc06g008140 component mtRPL16 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 2 115
No external refs found!