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  5. LOC_Os05g24770.1

LOC_Os05g24770.1 (BTI1, RTNLB1, LOC_Os05g24770)


Aliases : BTI1, RTNLB1, LOC_Os05g24770

Description : ER-associated protein (Reticulon)


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g24770.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00221140 evm_27.TU.AmTr_v1... Reticulon-like protein B9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00178230 evm_27.TU.AmTr_v1... Reticulon-like protein B5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G68230 No alias Reticulon family protein 0.03 OrthoFinder output from all 47 species
AT3G18260 No alias Reticulon family protein 0.03 OrthoFinder output from all 47 species
AT3G61560 No alias Reticulon family protein 0.02 OrthoFinder output from all 47 species
AT4G01230 No alias Reticulon family protein 0.06 OrthoFinder output from all 47 species
AT4G11220 RTNLB2, BTI2 VIRB2-interacting protein 2 0.03 OrthoFinder output from all 47 species
Adi_g019603 BTI1, RTNLB1 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Ala_g24666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24680 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ala_g25844 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Als_g08605 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Als_g42179 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Als_g42757 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Als_g50102 BTI1, RTNLB1 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Aob_g01159 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Aop_g09568 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Aop_g13484 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Cba_g00537 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Cba_g04424 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Cba_g08417 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Cba_g11444 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ceric.10G041900.1 Ceric.10G041900 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ceric.27G014800.1 Ceric.27G014800 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.69 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g03669 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Dcu_g32478 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Dcu_g36852 BTI1, RTNLB1 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Dcu_g49784 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ehy_g13025 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01008336001 No alias Reticulon-like protein B9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011845001 No alias Reticulon-like protein B9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_09323 RTNLB2, BTI2 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Gb_10741 No alias ER-associated protein (Reticulon) 0.04 OrthoFinder output from all 47 species
LOC_Os01g12650.1 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.04 OrthoFinder output from all 47 species
Len_g09513 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Lfl_g05242 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Lfl_g27211 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
MA_654072g0010 No alias ER-associated protein (Reticulon) 0.04 OrthoFinder output from all 47 species
Mp6g03260.1 RTNLB2, BTI2 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Pir_g12014 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012702 BTI1, RTNLB1 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Sam_g11395 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Sam_g37684 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Smo167511 No alias Reticulon-like protein B2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc03g119190.3.1 Solyc03g119190 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Solyc06g082740.3.1 Solyc06g082740 ER-associated protein (Reticulon) 0.04 OrthoFinder output from all 47 species
Solyc08g081730.4.1 RTNLB2, BTI2,... ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Solyc09g055250.3.1 Solyc09g055250 ER-associated protein (Reticulon) 0.05 OrthoFinder output from all 47 species
Spa_g48899 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Zm00001e027185_P001 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.08 OrthoFinder output from all 47 species
Zm00001e029083_P001 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Zm00001e031369_P001 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.05 OrthoFinder output from all 47 species
Zm00001e032328_P001 Zm00001e032328 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 68 222
No external refs found!