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  5. LOC_Os05g27034.1

LOC_Os05g27034.1 (LOC_Os05g27034)


Aliases : LOC_Os05g27034

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g27034.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g03590.1 LOC_Os01g03590 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g19960.1 LOC_Os01g19960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g24510.1 LOC_Os01g24510 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g29710.1 LOC_Os01g29710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g36766.1 LOC_Os01g36766 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g38810.1 LOC_Os01g38810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g01420.1 LOC_Os02g01420 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g16120.1 LOC_Os02g16120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g17110.1 LOC_Os02g17110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g25370.1 LOC_Os02g25370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g25200.1 LOC_Os03g25200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g30080.1 LOC_Os03g30080 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g03350.1 LOC_Os04g03350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g26360.1 LOC_Os04g26360 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g26410.1 LOC_Os04g26410 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g28650.1 LOC_Os04g28650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g29440.1 LOC_Os04g29440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g29900.1 LOC_Os04g29900 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g43590.1 LOC_Os04g43590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g03950.1 LOC_Os05g03950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g10400.1 LOC_Os05g10400 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os05g14460.1 LOC_Os05g14460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g16580.1 LOC_Os05g16580 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g18990.1 LOC_Os05g18990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g27130.1 LOC_Os05g27130 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g27860.1 LOC_Os05g27860 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g10380.1 LOC_Os06g10380 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g19310.1 LOC_Os06g19310 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g21000.1 LOC_Os06g21000 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g33030.1 LOC_Os06g33030 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g35350.1 LOC_Os06g35350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g03440.1 LOC_Os07g03440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g15800.1 LOC_Os07g15800 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g46120.1 LOC_Os07g46120 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g12280.1 LOC_Os08g12280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g24250.1 LOC_Os08g24250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g26280.1 LOC_Os08g26280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g34590.1 LOC_Os08g34590 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os09g03040.1 LOC_Os09g03040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g13560.1 LOC_Os09g13560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g15610.1 LOC_Os09g15610 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g20450.1 LOC_Os09g20450 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g08360.1 LOC_Os10g08360 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os10g08370.1 LOC_Os10g08370 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os10g29010.1 LOC_Os10g29010 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g14350.1 LOC_Os11g14350 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os11g17410.1 LOC_Os11g17410 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g19550.1 LOC_Os11g19550 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g31180.1 LOC_Os11g31180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g35762.1 LOC_Os11g35762 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g44100.1 LOC_Os11g44100 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g12200.1 LOC_Os12g12200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g14200.1 LOC_Os12g14200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g14650.1 LOC_Os12g14650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g26600.1 LOC_Os12g26600 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g28740.1 LOC_Os12g28740 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g33060.1 PIN5, LOC_Os12g33060 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os12g35720.1 LOC_Os12g35720 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g36480.1 LOC_Os12g36480 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 764 800
No external refs found!