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  5. LOC_Os05g27450.1

LOC_Os05g27450.1 (LOC_Os05g27450)


Aliases : LOC_Os05g27450

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g27450.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g03590.1 LOC_Os01g03590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g29710.1 LOC_Os01g29710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g34360.1 LOC_Os01g34360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g26410.1 LOC_Os04g26410 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g16580.1 LOC_Os05g16580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g27860.1 LOC_Os05g27860 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g19310.1 LOC_Os06g19310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g21000.1 LOC_Os06g21000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g46120.1 LOC_Os07g46120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g26280.1 LOC_Os08g26280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g13560.1 LOC_Os09g13560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g15610.1 LOC_Os09g15610 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g20450.1 LOC_Os09g20450 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g29010.1 LOC_Os10g29010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g14350.1 LOC_Os11g14350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g31180.1 LOC_Os11g31180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g35762.1 LOC_Os11g35762 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g44100.1 LOC_Os11g44100 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g11600.1 LOC_Os12g11600 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g14200.1 LOC_Os12g14200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g36480.1 LOC_Os12g36480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 841 943
No external refs found!