LOC_Os05g27570.1 (LOC_Os05g27570)


Aliases : LOC_Os05g27570

Description : no hits & (original description: none)


Gene families : OG0002555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002555_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g27570.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Adi_g054749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05155 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0493.g073550 No alias not classified & original description: CDS=1-1746 0.02 OrthoFinder output from all 47 species
Dcu_g05633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030242001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01032726001 No alias Wound-induced protein 1 OS=Solanum tuberosum 0.04 OrthoFinder output from all 47 species
Mp6g19100.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g02162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo43451 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc06g048780.1.1 Solyc06g048780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g18784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001363_P003 Zm00001e001363 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e023930_P001 Zm00001e023930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
InterPro domains Description Start Stop
IPR021369 DUF2985 70 148
IPR006461 PLAC_motif_containing 273 409
No external refs found!