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  5. LOC_Os05g27790.1

LOC_Os05g27790.1 (LOC_Os05g27790)


Aliases : LOC_Os05g27790

Description : CASP-like protein 4B4 OS=Oryza sativa subsp. japonica (sp|q5w6m3|csplg_orysj : 251.0)


Gene families : OG0003721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003721_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g27790.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g02860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G043500.1 Ceric.08G043500 not classified & original description: pacid=50638151... 0.02 OrthoFinder output from all 47 species
Dac_g13776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007763001 No alias CASP-like protein 4A3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_17252 No alias CASP-like protein 4A2 OS=Zea mays (sp|c4jaf2|csple_maize : 80.5) 0.02 OrthoFinder output from all 47 species
Gb_39802 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_181357g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g23739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g080560.3.1 Solyc08g080560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 57 186
No external refs found!