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  5. LOC_Os05g27860.1

LOC_Os05g27860.1 (LOC_Os05g27860)


Aliases : LOC_Os05g27860

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g27860.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g08730.1 LOC_Os01g08730 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os01g18200.1 LOC_Os01g18200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g18550.1 LOC_Os01g18550 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os01g19960.1 LOC_Os01g19960 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g20190.1 LOC_Os01g20190 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g21480.1 LOC_Os01g21480 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os01g24530.1 LOC_Os01g24530 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g29710.1 LOC_Os01g29710 no hits & (original description: none) 0.33 OrthoFinder output from all 47 species
LOC_Os01g35254.1 ZAR1, LOC_Os01g35254 Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
LOC_Os01g36766.1 LOC_Os01g36766 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g08280.1 LOC_Os02g08280 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os02g15330.1 LOC_Os02g15330 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g25370.1 LOC_Os02g25370 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os02g37730.1 LOC_Os02g37730 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os03g07680.1 LOC_Os03g07680 no hits & (original description: none) 0.25 OrthoFinder output from all 47 species
LOC_Os03g25200.1 LOC_Os03g25200 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os03g30080.1 LOC_Os03g30080 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os03g54020.1 LOC_Os03g54020 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os04g06100.1 LOC_Os04g06100 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os04g07930.1 LOC_Os04g07930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g22840.1 LOC_Os04g22840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g25590.1 LOC_Os04g25590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g29440.1 LOC_Os04g29440 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os04g34820.1 LOC_Os04g34820 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g43590.1 LOC_Os04g43590 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os05g14000.1 LOC_Os05g14000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g14460.1 LOC_Os05g14460 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os05g27034.1 LOC_Os05g27034 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g27450.1 LOC_Os05g27450 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g39460.1 LOC_Os05g39460 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g39570.1 LOC_Os05g39570 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os06g10380.1 LOC_Os06g10380 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g15050.1 LOC_Os06g15050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g16540.1 LOC_Os06g16540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g19310.1 LOC_Os06g19310 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g21150.1 LOC_Os06g21150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g27900.1 LOC_Os06g27900 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os07g09540.1 LOC_Os07g09540 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os07g11850.1 LOC_Os07g11850 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os07g15800.1 LOC_Os07g15800 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g17510.1 LOC_Os07g17510 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os07g32750.1 LOC_Os07g32750 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g34090.1 LOC_Os07g34090 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os07g34200.1 LOC_Os07g34200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g39610.1 LOC_Os07g39610 no hits & (original description: none) 0.33 OrthoFinder output from all 47 species
LOC_Os07g46120.1 LOC_Os07g46120 no hits & (original description: none) 0.2 OrthoFinder output from all 47 species
LOC_Os08g03730.1 LOC_Os08g03730 no hits & (original description: none) 0.2 OrthoFinder output from all 47 species
LOC_Os08g08670.1 LOC_Os08g08670 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os08g08950.1 LOC_Os08g08950 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os08g12280.1 LOC_Os08g12280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g17120.1 LOC_Os08g17120 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os08g24250.1 LOC_Os08g24250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g24590.1 LOC_Os08g24590 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os08g26280.1 LOC_Os08g26280 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os08g27180.1 LOC_Os08g27180 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os08g36730.1 LOC_Os08g36730 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os09g02090.1 LOC_Os09g02090 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g03040.1 LOC_Os09g03040 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os09g07330.1 LOC_Os09g07330 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os09g11060.1 LOC_Os09g11060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g13560.1 LOC_Os09g13560 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os09g15610.1 LOC_Os09g15610 no hits & (original description: none) 0.33 OrthoFinder output from all 47 species
LOC_Os09g17290.1 LOC_Os09g17290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g20160.1 LOC_Os09g20160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g20450.1 LOC_Os09g20450 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os09g25240.1 LOC_Os09g25240 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os09g37220.1 LOC_Os09g37220 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g16800.1 LOC_Os10g16800 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os10g19326.1 LOC_Os10g19326 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g20810.1 LOC_Os10g20810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g03950.1 LOC_Os11g03950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g14350.1 LOC_Os11g14350 no hits & (original description: none) 0.33 OrthoFinder output from all 47 species
LOC_Os11g17410.1 LOC_Os11g17410 no hits & (original description: none) 0.25 OrthoFinder output from all 47 species
LOC_Os11g23810.1 LOC_Os11g23810 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g24870.1 LOC_Os11g24870 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g26070.1 LOC_Os11g26070 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g31180.1 LOC_Os11g31180 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os11g44100.1 LOC_Os11g44100 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os12g12200.1 LOC_Os12g12200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g14820.1 LOC_Os12g14820 no hits & (original description: none) 0.33 OrthoFinder output from all 47 species
LOC_Os12g16400.1 LOC_Os12g16400 no hits & (original description: none) 0.2 OrthoFinder output from all 47 species
LOC_Os12g19210.1 LOC_Os12g19210 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g22910.1 LOC_Os12g22910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g23240.1 LOC_Os12g23240 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os12g26070.1 LOC_Os12g26070 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g28740.1 LOC_Os12g28740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g33060.1 PIN5, LOC_Os12g33060 auxin transporter (PIN). auxin efflux transporter (PIN) 0.08 OrthoFinder output from all 47 species
LOC_Os12g33620.1 LOC_Os12g33620 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g36480.1 LOC_Os12g36480 no hits & (original description: none) 0.2 OrthoFinder output from all 47 species
LOC_Os12g37240.1 LOC_Os12g37240 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 652 752
No external refs found!