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  5. LOC_Os05g28210.1

LOC_Os05g28210.1 (LOC_Os05g28210)


Aliases : LOC_Os05g28210

Description : Embryonic abundant protein 1 OS=Oryza sativa subsp. japonica (sp|p46520|emp1_orysj : 103.0)


Gene families : OG0004590 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004590_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g28210.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AT2G40170 ATEM6, GEA6, EM6 Stress induced protein 0.12 OrthoFinder output from all 47 species
AT3G51810 ATEM1, EM1, AT3, GEA1 Stress induced protein 0.07 OrthoFinder output from all 47 species
Aop_g19402 ATEM6, GEA6, EM6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0034.g025404 No alias not classified & original description: CDS=102-398 0.08 OrthoFinder output from all 47 species
Azfi_s0128.g048782 No alias not classified & original description: CDS=137-424 0.09 OrthoFinder output from all 47 species
Ceric.01G126900.1 ATEM6, GEA6,... not classified & original description: pacid=50591397... 0.07 OrthoFinder output from all 47 species
Ceric.10G034500.1 ATEM1, EM1, AT3,... not classified & original description: pacid=50612691... 0.03 OrthoFinder output from all 47 species
Ceric.10G034700.1 ATEM1, EM1, AT3,... not classified & original description: pacid=50612496... 0.06 OrthoFinder output from all 47 species
Ceric.12G020900.1 ATEM6, GEA6,... not classified & original description: pacid=50602478... 0.05 OrthoFinder output from all 47 species
Ceric.36G064900.1 ATEM6, GEA6,... not classified & original description: pacid=50567972... 0.05 OrthoFinder output from all 47 species
Ceric.36G065100.1 ATEM6, GEA6,... not classified & original description: pacid=50568345... 0.06 OrthoFinder output from all 47 species
Ceric.39G026600.1 ATEM6, GEA6,... not classified & original description: pacid=50583443... 0.03 OrthoFinder output from all 47 species
GSVIVT01011188001 ATEM6, GEA6, EM6 Protein SLE2 OS=Glycine max 0.1 OrthoFinder output from all 47 species
GSVIVT01032795001 No alias Protein SLE2 OS=Glycine max 0.14 OrthoFinder output from all 47 species
GSVIVT01032796001 ATEM6, GEA6, EM6 Protein EMB-1 OS=Daucus carota 0.16 OrthoFinder output from all 47 species
Len_g56230 ATEM1, EM1, AT3, GEA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32321 ATEM6, GEA6, EM6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_303496g0010 ATEM6, GEA6, EM6 Em-like protein OS=Picea glauca (sp|q40864|eml_picgl : 83.6) 0.05 OrthoFinder output from all 47 species
MA_3324524g0010 ATEM6, GEA6, EM6 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_6262426g0010 ATEM6, GEA6, EM6 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g08860.1 ATEM6, GEA6, EM6 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g15340.1 ATEM6, GEA6, EM6 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc06g048840.3.1 ATEM6, GEA6,... no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Solyc09g014750.1.1 ATEM6, GEA6,... Carrot ABA-induced in somatic embryos 3 OS=Daucus carota... 0.18 OrthoFinder output from all 47 species
Zm00001e031488_P001 ATEM6, GEA6,... Protein SLE1 OS=Glycine max (sp|i1n2z5|sle1_soybn : 95.1) 0.21 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR038956 LEA_5 44 91
No external refs found!