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  5. LOC_Os05g28740.1

LOC_Os05g28740.1 (LOC_Os05g28740)


Aliases : LOC_Os05g28740

Description : no hits & (original description: none)


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g28740.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G03270 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g001566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g042687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g048389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00449.t1 Aspi01Gene00449 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18261.t1 Aspi01Gene18261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28485.t1 Aspi01Gene28485 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29654.t1 Aspi01Gene29654 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37517.t1 Aspi01Gene37517 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37517.t2 Aspi01Gene37517 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37518.t1 Aspi01Gene37518 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37519.t1 Aspi01Gene37519 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55688.t1 Aspi01Gene55688 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59960.t1 Aspi01Gene59960 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66771.t1 Aspi01Gene66771 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0157.g053757 No alias not classified & original description: CDS=268-750 0.02 OrthoFinder output from all 47 species
Cba_g27633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z137100.1 Ceric.1Z137100 not classified & original description: pacid=50577015... 0.02 OrthoFinder output from all 47 species
Ceric.1Z137200.1 Ceric.1Z137200 not classified & original description: pacid=50577014... 0.03 OrthoFinder output from all 47 species
Ceric.24G021300.1 Ceric.24G021300 not classified & original description: pacid=50629890... 0.04 OrthoFinder output from all 47 species
Dac_g26303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20927 RD2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g00336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35958 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027993001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031226001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01031228001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_20331 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_24194 No alias Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_32427 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_33859 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g19270.1 LOC_Os03g19270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g36600.1 LOC_Os07g36600 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g13337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10063081g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10431338g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434855g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435390g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10437265g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10437265g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_108930g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_111185g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_188861g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_34981g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_61335g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7063g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_720108g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_92393g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g02210.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g07493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63571 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100370.3.1 Solyc01g100370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g079410.2.1 Solyc02g079410 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g014600.3.1 Solyc04g014600 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g009050.3.1 Solyc06g009050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g00638 ATPHOS34, PHOS34 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018234_P001 Zm00001e018234 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035202_P002 Zm00001e035202 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e039685_P001 Zm00001e039685 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 14 170
No external refs found!