1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g31910.2

LOC_Os05g31910.2 (LOC_Os05g31910)


Aliases : LOC_Os05g31910

Description : subfamily ABCG transporter


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g31910.2
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT3G53510 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT5G13580 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0120.g046757 No alias subfamily ABCG transporter & original description: CDS=1-2250 0.03 OrthoFinder output from all 47 species
Cba_g03340 No alias subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g17500 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08003 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10068 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Gb_19188 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os09g23640.1 LOC_Os09g23640 lipid transporter (STR) 0.06 OrthoFinder output from all 47 species
Pp3c9_18880V3.1 Pp3c9_18880 ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
Solyc03g007690.1.1 Solyc03g007690 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Tin_g11561 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44760 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Zm00001e027604_P001 Zm00001e027604 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e031556_P001 Zm00001e031556 subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Zm00001e042020_P001 Zm00001e042020 ABC transporter G family member 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 385 593
IPR003439 ABC_transporter-like_ATP-bd 85 247
No external refs found!