Aliases : SCY2, EMB2289, LOC_Os05g33020
Description : component SecY2 of inner envelope Sec2 post-import insertion system
Gene families : OG0005693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005693_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os05g33020.1 | |
| Cluster | HCCA: Cluster_56 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00237300 | SCY2, EMB2289,... | Protein translocation.chloroplast.inner envelope Sec2... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G31530 | SCY2, EMB2289 | SecY protein transport family protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058257 | SCY2, EMB2289 | component *(SecY2) of inner envelope Sec2 post-import... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.25G055200.1 | SCY2, EMB2289,... | component *(SecY2) of inner envelope Sec2 post-import... | 0.03 | OrthoFinder output from all 47 species | |
| Cre03.g158250 | SCY2, EMB2289 | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g03448 | SCY2, EMB2289 | component *(SecY2) of inner envelope Sec2 post-import... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011128001 | SCY2, EMB2289 | Protein translocation.chloroplast.inner envelope Sec2... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_28420 | SCY2, EMB2289 | component SecY2 of inner envelope Sec2 post-import... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13849 | SCY2, EMB2289 | component *(SecY2) of inner envelope Sec2 post-import... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g26069 | SCY2, EMB2289 | component *(SecY2) of inner envelope Sec2 post-import... | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g27500.1 | SCY2, EMB2289 | component SecY2 of inner envelope Sec2 post-import... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g24458 | SCY2, EMB2289 | component *(SecY2) of inner envelope Sec2 post-import... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29035 | SCY2, EMB2289 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31235 | SCY2, EMB2289 | component *(SecY2) of inner envelope Sec2 post-import... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27421 | No alias | component *(SecY2) of inner envelope Sec2 post-import... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27422 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo74191 | SCY2, EMB2289 | Protein translocation.chloroplast.inner envelope Sec2... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g065120.4.1 | SCY2, EMB2289,... | component SecY2 of inner envelope Sec2 post-import... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0015031 | protein transport | IEA | Interproscan |
| CC | GO:0016020 | membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006813 | potassium ion transport | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002208 | SecY/SEC61-alpha | 173 | 520 |
| No external refs found! |
