LOC_Os05g33810.1 (SPL7, ATSPL7, LOC_Os05g33810)

Aliases : SPL7, ATSPL7, LOC_Os05g33810

Description : transcription factor (SBP). copper homeostasis regulator (SPL7)

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g33810.1
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AT5G43270	SPL2	squamosa promoter binding protein-like 2	0.04	OrthoFinder output from all 47 species
AT5G50570	SPL13, SPL13A	Squamosa promoter-binding protein-like (SBP domain)...	0.04	OrthoFinder output from all 47 species
AT5G50670	SPL13, SPL13B	Squamosa promoter-binding protein-like (SBP domain)...	0.04	OrthoFinder output from all 47 species
Cre02.g104700	SPL2	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder output from all 47 species
Cre07.g335150	SPL3	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
Gb_26599	SPL10	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Mp8g11850.1	SPL7, ATSPL7	transcription factor (SBP). copper homeostasis regulator (SPL7)	0.02	OrthoFinder output from all 47 species
Ppi_g14541	SPL8	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006315	SPL7, ATSPL7	SBP-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Zm00001e013761_P001	SPL2, Zm00001e013761	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008289	lipid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	171	245

External Links

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