LOC_Os05g36160.1 (GBF4, LOC_Os05g36160)

Aliases : GBF4, LOC_Os05g36160

Description : transcription factor (bZIP)

Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g36160.1
Cluster	HCCA: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00152p00081700	FD-1, FD,...	RNA biosynthesis.transcriptional activation.bZIP...	0.02	OrthoFinder output from all 47 species
AT5G44080	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.02	OrthoFinder output from all 47 species
Adi_g001969	ABF1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g04702	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene01755.t1	ABF1, Aspi01Gene01755	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0206.g057820	No alias	not classified & original description: CDS=1-264	0.03	OrthoFinder output from all 47 species
Cba_g11612	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.06G081700.1	AREB2, ABF4,...	bZIP class-A transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.27G043400.1	ABF2, ATAREB1,...	bZIP class-A transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dcu_g05518	DPBF3, AREB3	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01001940001	DPBF3, AREB3	RNA biosynthesis.transcriptional activation.bZIP...	0.04	OrthoFinder output from all 47 species
GSVIVT01029696001	GBF4	RNA biosynthesis.transcriptional activation.bZIP...	0.03	OrthoFinder output from all 47 species
Len_g03850	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g55556	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g64108	ABI5, GIA1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g05249	ABF1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
MF	GO:0035299	inositol pentakisphosphate 2-kinase activity	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	186	237

External Links

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LOC_Os05g36160.1 (GBF4, LOC_Os05g36160)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation