Aliases : LOC_Os05g37330
Description : component RPP2 of LSU proteome component
Gene families : OG0000215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000215_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os05g37330.1 | |
| Cluster | HCCA: Cluster_147 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g072596 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g106129 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g08057 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g44743 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G042100.1 | Ceric.02G042100 | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020830.75 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g50270 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g29967 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g23184 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c1_27060V3.1 | Pp3c1_27060 | 60S acidic ribosomal protein family | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g44490 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g50722 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16387 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g44452 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g067100.2.1 | Solyc11g067100 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005048 | signal sequence binding | IEP | HCCA |
| BP | GO:0006621 | protein retention in ER lumen | IEP | HCCA |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | HCCA |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | HCCA |
| MF | GO:0042277 | peptide binding | IEP | HCCA |
| BP | GO:0045185 | maintenance of protein location | IEP | HCCA |
| MF | GO:0046923 | ER retention sequence binding | IEP | HCCA |
| BP | GO:0051235 | maintenance of location | IEP | HCCA |
| BP | GO:0051651 | maintenance of location in cell | IEP | HCCA |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
