LOC_Os05g38620.1 (LOC_Os05g38620)


Aliases : LOC_Os05g38620

Description : C2H2 zinc finger transcription factor


Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g38620.1

Target Alias Description ECC score Gene Family Method Actions
AT5G59820 RHL41, ZAT12 C2H2-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
Als_g31109 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Cba_g24559 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Ceric.07G098000.1 Ceric.07G098000 regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Gb_06485 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_2695744g0010 No alias C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
MA_922988g0010 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g25888 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Pir_g23648 No alias C2H2-type subclass ZAT transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g32023 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Ppi_g62772 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011786 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Sam_g35489 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Solyc06g075780.3.1 Solyc06g075780 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Tin_g26366 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Zm00001e002063_P001 AZF1, ZF1, Zm00001e002063 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!