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  5. LOC_Os05g39480.1

LOC_Os05g39480.1 (FRS5, LOC_Os05g39480)


Aliases : FRS5, LOC_Os05g39480

Description : transcription factor (FAR1)


Gene families : OG0012282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012282_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g39480.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g63030.1 FRS5, LOC_Os01g63030 transcription factor (FAR1) 0.15 OrthoFinder output from all 47 species
LOC_Os02g31850.1 FRS5, LOC_Os02g31850 transcription factor (FAR1) 0.06 OrthoFinder output from all 47 species
LOC_Os11g17430.1 FRS5, LOC_Os11g17430 transcription factor (FAR1) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 151 229
IPR018289 MULE_transposase_dom 353 446
IPR007527 Znf_SWIM 637 668
No external refs found!