LOC_Os05g39870.1 (CIPK2, SnRK3.2, LOC_Os05g39870)

Aliases : CIPK2, SnRK3.2, LOC_Os05g39870

Description : SNF1-related protein kinase (SnRK3)

Gene families : OG0000065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g39870.1

Target	Alias	Description	ECC score	Gene Family Method
AT4G30960	CIPK6, SIP3,...	SOS3-interacting protein 3	0.05	OrthoFinder output from all 47 species
Ala_g32969	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
Als_g22382	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Cba_g57988	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Gb_16900	PKS18, CIPK20, SnRK3.6	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
LOC_Os05g39890.1	CIPK2, SnRK3.2,...	CBL-interacting protein kinase 28 OS=Oryza sativa subsp....	0.06	OrthoFinder output from all 47 species
MA_14540g0020	PKS18, CIPK20, SnRK3.6	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Sam_g51998	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Spa_g26629	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Spa_g51801	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
CC	GO:0031082	BLOC complex	IEP	HCCA
CC	GO:0031083	BLOC-1 complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	106	359
IPR004041	NAF_dom	404	460

External Links

No external refs found!

LOC_Os05g39870.1 (CIPK2, SnRK3.2, LOC_Os05g39870)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation