Aliases : LOC_Os05g40960
Description : G2-like GARP transcription factor
Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00151950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00044p00042560 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00094p00028710 | APL, WDY,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00142p00049490 | evm_27.TU.AmTr_v1... | Nutrient uptake.phosphorus assimilation.phosphate... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G14600 | No alias | Homeodomain-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT2G06020 | No alias | Homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G04030 | No alias | Homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G04580 | No alias | Homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G06800 | No alias | myb-like HTH transcriptional regulator family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G18240 | ATMYR1, MYR1 | myb-related protein 1 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g017665 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g024494 | ATMYR1, MYR1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g025472 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g052692 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g057981 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g070212 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g095329 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g114670 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g125804 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06660 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g11835 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g12428 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g10988 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13064 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g01879 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04353 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g09241 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g12175 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g12764 | No alias | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g18204 | No alias | transcription factor *(CLAUSA) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g22007 | No alias | GARP subgroup PHL transcription factor & original... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g22341 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g33847 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g39874 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g29353 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g30442 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g40723 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05983 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g37611 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene14328.t1 | KAN, KAN1,... | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene21949.t1 | Aspi01Gene21949 | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene32964.t1 | Aspi01Gene32964 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33723.t1 | Aspi01Gene33723 | transcription factor *(CLAUSA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene33756.t1 | Aspi01Gene33756 | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene40313.t1 | KAN, KAN1,... | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene48429.t1 | Aspi01Gene48429 | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene59765.t1 | Aspi01Gene59765 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene64388.t1 | Aspi01Gene64388 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007457 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03918 | No alias | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g11994 | No alias | GARP subgroup PHL transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g15047 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g16380 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20180 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g26945 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g70820 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G099300.1 | Ceric.07G099300 | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G068700.1 | Ceric.10G068700 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G027900.1 | Ceric.21G027900 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G068700.1 | Ceric.28G068700 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G067100.1 | Ceric.31G067100 | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g15392 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g27691 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04642 | No alias | transcription factor *(CLAUSA) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g10311 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g13802 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17436 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g16600 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g43193 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04920 | KAN2 | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g11610 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21970 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g23627 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g31337 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000606001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01007064001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021072001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021225001 | No alias | Putative Myb family transcription factor At1g14600... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01026319001 | KAN, KAN1 | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_25991 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25992 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Gb_27262 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38388 | No alias | PHR1 transcription factor involved in proline synthesis... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g20900.1 | LOC_Os03g20900 | G2-like GARP transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g21240.1 | PHL1, LOC_Os03g21240 | PHR1 transcription factor involved in proline synthesis... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g13527 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g21596 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g01961 | PHR1, AtPHR1 | transcription factor *(PHR1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06998 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g36756 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_93883g0010 | PHL1 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g18681 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g24104 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g24340 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07407 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g09161 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17264 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20359 | KAN2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43900 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01267 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03399 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19769 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g23688 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g28360 | No alias | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g39083 | No alias | GARP subgroup PHL transcription factor & original... | 0.12 | OrthoFinder output from all 47 species | |
| Pir_g55133 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g09624 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06853 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g22170 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g29510 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002208 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0015.g006600 | KAN4, ATS | KANADI-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007773 | PHL1 | not classified & original description: CDS=638-1480 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0055.g014434 | No alias | not classified & original description: CDS=36-716 | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0069.g016534 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g49883 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g49915 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g008480.2.1 | Solyc04g008480 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g066180.4.1 | Solyc06g066180 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g005370.1.1 | Solyc09g005370 | G2-like GARP transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Solyc11g022470.2.1 | Solyc11g022470 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g006280.3.1 | Solyc12g006280 | Putative Myb family transcription factor At1g14600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g017370.3.1 | APL, WDY, Solyc12g017370 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04247 | No alias | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g07140 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22319 | No alias | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g51060 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g56754 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g03358 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g18822 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e005797_P001 | KAN4, ATS, Zm00001e005797 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009294_P001 | Zm00001e009294 | Putative Myb family transcription factor At1g14600... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e013626_P001 | Zm00001e013626 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015514_P001 | KAN2, Zm00001e015514 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023282_P002 | KAN2, Zm00001e023282 | G2-like GARP transcription factor | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e030689_P002 | Zm00001e030689 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037731_P001 | APL, WDY, Zm00001e037731 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037761_P001 | Zm00001e037761 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |
