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  5. LOC_Os05g44300.1

LOC_Os05g44300.1 (LOC_Os05g44300)


Aliases : LOC_Os05g44300

Description : no hits & (original description: none)


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g44300.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT1G12030 No alias Protein of unknown function (DUF506) 0.07 OrthoFinder output from all 47 species
Aop_g69384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0254.g060413 No alias not classified & original description: CDS=230-1843 0.05 OrthoFinder output from all 47 species
Ceric.01G086800.1 Ceric.01G086800 not classified & original description: pacid=50591342... 0.05 OrthoFinder output from all 47 species
Ceric.01G087100.1 Ceric.01G087100 not classified & original description: pacid=50592608... 0.03 OrthoFinder output from all 47 species
Dac_g04659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g23680.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g04289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001909 No alias not classified & original description: CDS=1-747 0.02 OrthoFinder output from all 47 species
Sam_g11288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032942_P001 Zm00001e032942 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 17 252
No external refs found!