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  5. LOC_Os05g46020.1

LOC_Os05g46020.1 (ATWRKY50, WRKY50,...)


Aliases : ATWRKY50, WRKY50, LOC_Os05g46020

Description : transcription factor (WRKY)


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g46020.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00229650 WRKY53,... RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
AMTR_s00058p00090300 WRKY4,... RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00103580 WRKY53,... RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
AT1G80840 ATWRKY40, WRKY40 WRKY DNA-binding protein 40 0.03 OrthoFinder output from all 47 species
AT2G30250 ATWRKY25, WRKY25 WRKY DNA-binding protein 25 0.04 OrthoFinder output from all 47 species
AT2G40740 WRKY55, ATWRKY55 WRKY DNA-binding protein 55 0.04 OrthoFinder output from all 47 species
AT2G46400 WRKY46, ATWRKY46 WRKY DNA-binding protein 46 0.06 OrthoFinder output from all 47 species
AT3G56400 ATWRKY70, WRKY70 WRKY DNA-binding protein 70 0.03 OrthoFinder output from all 47 species
AT4G11070 AtWRKY41, WRKY41 WRKY family transcription factor 0.04 OrthoFinder output from all 47 species
AT4G23810 WRKY53, ATWRKY53 WRKY family transcription factor 0.05 OrthoFinder output from all 47 species
AT4G31800 WRKY18, ATWRKY18 WRKY DNA-binding protein 18 0.07 OrthoFinder output from all 47 species
AT5G24110 ATWRKY30, WRKY30 WRKY DNA-binding protein 30 0.04 OrthoFinder output from all 47 species
AT5G64810 ATWRKY51, WRKY51 WRKY DNA-binding protein 51 0.05 OrthoFinder output from all 47 species
Adi_g054710 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117330 WRKY33, ATWRKY33 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g04786 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13852 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20989 WRKY4 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21962 WRKY23, ATWRKY23 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21159 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07786 ATWRKY58, WRKY58 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21563 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24152 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37985 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39118 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48769 No alias WRKY-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Als_g49189 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49283 WRKY3 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50608 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56491 ATWRKY57, WRKY57 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56728 ATWRKY58, WRKY58 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57885 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17627 WRKY31, ATWRKY31 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34105 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05172 WRKY4 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31865 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g39081 No alias WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g54130 ATWRKY70, WRKY70 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17672.t1 WRKY28,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27879.t1 WRKY48,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39448.t1 WRKY3, Aspi01Gene39448 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49407.t1 ATWRKY71,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54083.t1 WRKY6, ATWRKY6,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64694.t1 WRKY6, ATWRKY6,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66845.t1 WRKY42,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66845.t2 WRKY42,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011077 ATWRKY71, WRKY71 WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0028.g023994 WRKY75, ATWRKY75 not classified & original description: CDS=78-1070 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043567 ATWRKY71, WRKY71 WRKY-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Azfi_s0505.g073943 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: CDS=1-474 0.05 OrthoFinder output from all 47 species
Azfi_s0937.g093180 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: CDS=1-1605 0.04 OrthoFinder output from all 47 species
Ceric.1Z080800.1 AtWRKY20,... WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.24G019100.1 Ceric.24G019100 WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.31G073500.1 Ceric.31G073500 not classified & original description: pacid=50574451... 0.06 OrthoFinder output from all 47 species
Ceric.32G056300.1 AtWRKY20,... WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g12166 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26985 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27869 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11035 ATWRKY58, WRKY58 WRKY-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g13021 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31670 ATWRKY50, WRKY50 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31692 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09836 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10883 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19263 WRKY55, ATWRKY55 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20799 WRKY33, ATWRKY33 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21871 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29785 WRKY56, ATWRKY56 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001332001 WRKY3 RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
GSVIVT01012682001 WRKY6, ATWRKY6 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01015952001 ATWRKY40, WRKY40 RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
GSVIVT01019511001 WRKY53, ATWRKY53 RNA biosynthesis.transcriptional activation.WRKY... 0.06 OrthoFinder output from all 47 species
GSVIVT01021397001 WRKY28, ATWRKY28 RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
GSVIVT01022245001 ATWRKY51, WRKY51 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01024624001 WRKY33, ATWRKY33 RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
GSVIVT01027069001 WRKY53, ATWRKY53 RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
GSVIVT01028718001 WRKY53, ATWRKY53 RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
GSVIVT01030258001 WRKY33, ATWRKY33 RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
GSVIVT01032661001 ATWRKY70, WRKY70 RNA biosynthesis.transcriptional activation.WRKY... 0.09 OrthoFinder output from all 47 species
GSVIVT01032662001 WRKY55, ATWRKY55 RNA biosynthesis.transcriptional activation.WRKY... 0.1 OrthoFinder output from all 47 species
GSVIVT01033194001 ATWRKY51, WRKY51 RNA biosynthesis.transcriptional activation.WRKY... 0.06 OrthoFinder output from all 47 species
GSVIVT01035426001 ATWRKY50, WRKY50 RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
GSVIVT01035884001 WRKY18, ATWRKY18 RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
GSVIVT01035885001 ATWRKY40, WRKY40 RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
Gb_00545 WRKY53, ATWRKY53 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Gb_01873 ATWRKY71, WRKY71 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Gb_05025 ATWRKY71, WRKY71 transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Gb_39366 WRKY31, ATWRKY31 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os01g09080.1 WRKY72,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Lfl_g09064 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14943 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g21575 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21580 WRKY33, ATWRKY33 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24750 AtWRKY41, WRKY41 WRKY-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
MA_10429098g0010 WRKY42, AtWRKY42 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434651g0010 WRKY4 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_10434976g0010 ATWRKY57, WRKY57 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_10436051g0010 WRKY6, ATWRKY6 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_126273g0010 ATWRKY57, WRKY57 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_16118g0010 WRKY2, ATWRKY2 transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
MA_179641g0010 ATWRKY71, WRKY71 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_2290g0010 ATWRKY30, WRKY30 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_23415g0010 ATWRKY50, WRKY50 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
MA_2535g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_310991g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_496691g0010 ATWRKY59, WRKY59 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
MA_49848g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_53351g0010 WRKY2, ATWRKY2 transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
MA_6177g0010 AtWRKY41, WRKY41 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_7068293g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_76002g0010 No alias transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Mp1g24950.1 ATWRKY64, WRKY64 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Mp6g16800.1 WRKY48, ATWRKY48 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Ore_g08142 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16886 WRKY42, AtWRKY42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20150 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27129 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g27458 WRKY33, ATWRKY33 transcription factor *(WRKY33) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27505 WRKY4 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63386 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g03208 WRKY3 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015874 WRKY28, ATWRKY28 WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020596 ATWRKY71, WRKY71 WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g08167 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08987 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g095630.3.1 AtWRKY41,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Solyc02g032950.3.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc03g095770.3.1 ATWRKY70,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Solyc04g072070.3.1 ATWRKY51,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Solyc05g050340.4.1 WRKY55,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc06g048870.3.1 WRKY55,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Solyc06g066370.4.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species
Solyc06g068460.3.1 ATWRKY40,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Solyc06g070990.3.1 WRKY61,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc08g008280.3.1 WRKY53,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Solyc09g014990.4.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.04 OrthoFinder output from all 47 species
Solyc12g042590.2.1 ATWRKY40,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Solyc12g056745.1.1 ATWRKY51,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Spa_g00878 WRKY56, ATWRKY56 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38478 WRKY4 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40583 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55223 ATWRKY50, WRKY50 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13422 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004183_P001 AtWRKY41,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e005732_P002 ATWRKY57,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Zm00001e009708_P001 WRKY53,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Zm00001e019418_P001 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
Zm00001e019446_P001 WRKY55,... transcription factor (WRKY) 0.06 OrthoFinder output from all 47 species
Zm00001e023991_P001 ATWRKY30,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e025096_P001 ATWRKY40,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e027140_P002 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species
Zm00001e028832_P001 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.04 OrthoFinder output from all 47 species
Zm00001e031518_P004 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.06 OrthoFinder output from all 47 species
Zm00001e033860_P001 ATWRKY30,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Zm00001e033862_P001 WRKY53,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e036450_P001 WRKY53,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e042185_P001 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 135 191
No external refs found!