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  5. LOC_Os05g46030.1

LOC_Os05g46030.1 (ATXIK, XI-17, XIK,...)


Aliases : ATXIK, XI-17, XIK, LOC_Os05g46030

Description : Myosin-17 OS=Arabidopsis thaliana (sp|f4k5j1|myo17_arath : 1276.0)


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g46030.1

Target Alias Description ECC score Gene Family Method Actions
AT4G28710 XIH, ATXIH Myosin family protein with Dil domain 0.02 OrthoFinder output from all 47 species
AT4G33200 XI-15, ATXI-I, XI-I myosin, putative 0.06 OrthoFinder output from all 47 species
AT5G43900 XI-6, ATMYA2, XI-2, MYA2 myosin 2 0.02 OrthoFinder output from all 47 species
Als_g30376 ATXIK, XI-17, XIK not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56316.t1 ATXIE, XIE,... class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Azfi_s0014.g013653 ATVIIIA, VIIIA not classified & original description: CDS=1824-4091 0.02 OrthoFinder output from all 47 species
Ceric.05G063900.1 ATXIK, XI-17,... class XI myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000367.45 XI-6, ATMYA2, XI-2, MYA2 Myosin-6 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.58 XI-8, XI-B, XIB, ATXIB Myosin-8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.59 XIF, ATMYO5, ATXIF Myosin-5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021108.24 XIF, ATMYO5, ATXIF Myosin-12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre09.g416250 ATVIIIA, VIIIA Myosin-1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01016822001 ATXIK, XI-17, XIK Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
MA_713000g0010 ATVIIIA, VIIIA Myosin-3 OS=Arabidopsis thaliana (sp|f4i507|myo3_arath : 204.0) 0.03 OrthoFinder output from all 47 species
Pnu_g13851 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Sam_g11849 No alias class VIII myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Solyc07g063590.4.1 ATMYOS1, ATM4,... class VIII myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Zm00001e004513_P002 ATVIIIA, VIIIA,... class VIII myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Zm00001e006446_P002 XI-8, XI-B, XIB,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004009 Myosin_N 10 46
IPR001609 Myosin_head_motor_dom 65 500
IPR001609 Myosin_head_motor_dom 535 758
IPR002710 Dilute_dom 2027 2080
No external refs found!