Aliases : PGP9, LOC_Os05g47500
Description : subfamily ABCB transporter
Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os05g47500.1 | |
| Cluster | HCCA: Cluster_347 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00056p00132920 | evm_27.TU.AmTr_v1... | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
| AT2G47000 | ATPGP4, PGP4, ABCB4, MDR4 | ATP binding cassette subfamily B4 | 0.07 | OrthoFinder output from all 47 species | |
| AT3G28345 | No alias | ABC transporter family protein | 0.01 | OrthoFinder output from all 47 species | |
| AT3G62150 | PGP21 | P-glycoprotein 21 | 0.02 | OrthoFinder output from all 47 species | |
| AT4G18050 | PGP9 | P-glycoprotein 9 | 0.01 | OrthoFinder output from all 47 species | |
| AT4G25960 | PGP2 | P-glycoprotein 2 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G46540 | PGP7 | P-glycoprotein 7 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g029160 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g056640 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g056650 | ABCB19,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39147 | No alias | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g26174 | No alias | subfamily ABCB transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g39233 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g18500 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Aob_g24344 | ATPGP4, PGP4, ABCB4, MDR4 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g24610 | PGP1, ABCB1, ATPGP1 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08993 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g22138 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g42964 | PGP11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g55125 | ABCB14, ATABCB14, PGP14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene42794.t1 | ATPGP4, PGP4,... | subfamily ABCB transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene46501.t1 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene46501.t2 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0039.g026389 | PGP11 | subfamily ABCB transporter & original description: CDS=323-4378 | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g75977 | No alias | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G084300.1 | ABCB19,... | subfamily ABCB transporter & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g23401 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g35376 | PGP21 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dac_g45466 | PGP11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26046 | PGP1, ABCB1, ATPGP1 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g33169 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02960 | PGP13 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g23811 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01021365001 | PGP9 | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01028256001 | PGP11 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032578001 | No alias | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_10215 | No alias | subfamily ABCB transporter | 0.01 | OrthoFinder output from all 47 species | |
| Gb_36503 | No alias | serine carboxypeptidase. subfamily ABCB transporter | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g18670.1 | PGP21, LOC_Os01g18670 | subfamily ABCB transporter | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os02g46680.1 | PGP2, LOC_Os02g46680 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g04600.1 | PGP11, LOC_Os05g04600 | ABC transporter B family member 4 OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
| Len_g06285 | PGP1, ABCB1, ATPGP1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g46613 | PGP1, ABCB1, ATPGP1 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_100742g0020 | PGP16 | ABC transporter B family member 16 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10134765g0010 | PGP11 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| MA_8519205g0010 | PGP17 | ABC transporter B family member 17 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_9148200g0010 | No alias | ABC transporter B family member 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g02910.1 | ABCB19,... | auxin efflux transporter (ABCB19). subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g06270.1 | PGP20 | subfamily ABCB transporter | 0.01 | OrthoFinder output from all 47 species | |
| Mp2g11920.1 | ABCB19,... | subfamily ABCB transporter | 0.01 | OrthoFinder output from all 47 species | |
| Mp7g04390.1 | ATPGP4, PGP4, ABCB4, MDR4 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
| Mpzg01120.1 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g26680 | PGP11 | subfamily ABCB transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g39983 | PGP3, MDR3 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g32847 | PGP21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29607 | No alias | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g35743 | No alias | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g14316 | PGP2 | subfamily ABCB transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g47037 | PGP11 | subfamily ABCB transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g47038 | PGP9 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g56055 | PGP21 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g60650 | PGP21 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c1_7210V3.1 | ABCB19,... | ATP binding cassette subfamily B19 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006153 | PGP11 | subfamily ABCB transporter & original description: CDS=261-4235 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0095.g019197 | No alias | subfamily ABCB transporter & original description: CDS=1-2220 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0214.g026004 | No alias | subfamily ABCB transporter & original description: CDS=930-4592 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0478.g027423 | PGP11 | subfamily ABCB transporter & original description: CDS=139-3981 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27139 | No alias | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g34273 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo123915 | PGP11 | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
| Smo148837 | ABCB19,... | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
| Smo231714 | No alias | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
| Smo410515 | ABCB19,... | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
| Smo92485 | ABCB19,... | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc03g005860.4.1 | PGP11, Solyc03g005860 | subfamily ABCB transporter | 0.01 | OrthoFinder output from all 47 species | |
| Solyc06g009280.1.1 | PGP11, Solyc06g009280 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g067300.2.1 | PGP11, Solyc11g067300 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g11244 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g31718 | PGP2 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e017444_P002 | PGP21, Zm00001e017444 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023274_P001 | PGP2, Zm00001e023274 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| MF | GO:0016887 | ATP hydrolysis activity | IEA | Interproscan |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |
