LOC_Os05g48650.1 (LOC_Os05g48650)

Aliases : LOC_Os05g48650

Description : transcription factor (DOG)

Gene families : OG0001119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001119_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g48650.1
Cluster	HCCA: Cluster_161

Target	Alias	Description	ECC score	Gene Family Method
AT3G14880	No alias	BEST Arabidopsis thaliana protein match is:...	0.03	OrthoFinder output from all 47 species
AT4G18650	No alias	transcription factor-related	0.04	OrthoFinder output from all 47 species
AT4G18660	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.11	OrthoFinder output from all 47 species
AT4G18680	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.11	OrthoFinder output from all 47 species
AT4G18690	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.02	OrthoFinder output from all 47 species
Dde_g24749	No alias	DOG-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021229001	No alias	Protein DOG1-like 4 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01022365001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.11	OrthoFinder output from all 47 species
Gb_21866	No alias	transcription factor (DOG)	0.02	OrthoFinder output from all 47 species
Len_g09477	TGA2, AHBP-1B	DOG-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g12650	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g22337	GSQ5, DOG1, ATDOG1	DOG-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g05853	No alias	DOG-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g28827	No alias	DOG-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g072570.2.1	GSQ5, DOG1,...	transcription factor (DOG)	0.1	OrthoFinder output from all 47 species
Solyc02g073580.1.1	Solyc02g073580	transcription factor (DOG)	0.01	OrthoFinder output from all 47 species
Solyc03g006120.4.1	Solyc03g006120	transcription factor (DOG)	0.15	OrthoFinder output from all 47 species
Solyc05g056410.1.1	Solyc05g056410	transcription factor (DOG)	0.05	OrthoFinder output from all 47 species
Solyc07g062380.1.1	Solyc07g062380	transcription factor (DOG)	0.03	OrthoFinder output from all 47 species
Solyc09g005610.4.1	RAS1, Solyc09g005610	transcription factor (DOG)	0.02	OrthoFinder output from all 47 species
Zm00001e016842_P002	Zm00001e016842	transcription factor (DOG)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
CC	GO:0005811	lipid droplet	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025422	TGA_domain	19	93

External Links

No external refs found!

LOC_Os05g48650.1 (LOC_Os05g48650)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation