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  5. LOC_Os05g49120.1

LOC_Os05g49120.1 (SSP4, LOC_Os05g49120)


Aliases : SSP4, LOC_Os05g49120

Description : RNA polymerase-II phosphatase. subcluster B phosphatase


Gene families : OG0000687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g49120.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cre09.g391541 SSP5 Protein modification.dephosphorylation.aspartate-based... 0.01 OrthoFinder output from all 47 species
Mp3g24640.1 No alias RNA polymerase-II phosphatase. subcluster B phosphatase.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 256 416
No external refs found!