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  5. LOC_Os05g49200.2

LOC_Os05g49200.2 (ATAPA1, APA1, LOC_Os05g49200)


Aliases : ATAPA1, APA1, LOC_Os05g49200

Description : pepsin-type protease


Gene families : OG0000857 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000857_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g49200.2

Target Alias Description ECC score Gene Family Method Actions
Aop_g05379 ATAPA1, APA1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001355.3 ATAPA1, APA1 Protein degradation.peptidase families.aspartic-type... 0.01 OrthoFinder output from all 47 species
Cre04.g226850 ATAPA1, APA1 Protein degradation.peptidase families.aspartic-type... 0.01 OrthoFinder output from all 47 species
Pnu_g25143 ATAPA1, APA1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Zm00001e025442_P005 ATAPA1, APA1,... pepsin-type protease 0.03 OrthoFinder output from all 47 species
Zm00001e026553_P002 ATAPA1, APA1,... pepsin-type protease 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR008138 SapB_2 318 351
IPR007856 SapB_1 381 418
IPR033121 PEPTIDASE_A1 84 507
No external refs found!