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  5. LOC_Os06g02240.1

LOC_Os06g02240.1 (LOC_Os06g02240)


Aliases : LOC_Os06g02240

Description : Binding partner of ACD11 1 OS=Arabidopsis thaliana (sp|q9lfd5|bpa1_arath : 244.0)


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g02240.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g24118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g43787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06731 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50706.t1 Aspi01Gene50706 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G056000.1 Ceric.08G056000 not classified & original description: pacid=50637635... 0.03 OrthoFinder output from all 47 species
Ceric.25G062800.1 Ceric.25G062800 not classified & original description: pacid=50593278... 0.02 OrthoFinder output from all 47 species
Ceric.28G042200.1 Ceric.28G042200 not classified & original description: pacid=50570559... 0.05 OrthoFinder output from all 47 species
GSVIVT01020030001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g29520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g11240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g067390.3.1 Solyc02g067390 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Tin_g28029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036683_P001 Zm00001e036683 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 10 69
No external refs found!