LOC_Os06g06860.1 (LOC_Os06g06860)

Aliases : LOC_Os06g06860

Description : no description available(sp|q2r8l1|rga5s_orysj : 290.0)

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g06860.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00245940	evm_27.TU.AmTr_v1...	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00058p00097500	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00061p00207600	evm_27.TU.AmTr_v1...	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00088p00057720	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G58400	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT1G58848	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT1G59218	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT3G46710	No alias	NB-ARC domain-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
GSVIVT01012168001	RPM1, RPS3	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01018564001	No alias	Putative disease resistance RPP13-like protein 3...	0.03	OrthoFinder output from all 47 species
GSVIVT01024114001	No alias	External stimuli response.biotic stress.pathogen...	0.02	OrthoFinder output from all 47 species
LOC_Os11g12340.2	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os11g16530.2	HRT, RCY1, RPP8,...	no description available(sp\|f7j0n2\|rga5r_orysj : 285.0)	0.04	OrthoFinder output from all 47 species
LOC_Os12g17410.1	RPM1, RPS3,...	no description available(sp\|q2r8l1\|rga5s_orysj : 257.0)	0.02	OrthoFinder output from all 47 species
Solyc03g005670.3.1	Solyc03g005670	Disease resistance RPP8-like protein 3 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Solyc11g010160.1.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	1	222

External Links

No external refs found!

LOC_Os06g06860.1 (LOC_Os06g06860)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation