LOC_Os06g08560.1 (MRP11, ABCC13,...)

Aliases : MRP11, ABCC13, ATMRP11, LOC_Os06g08560

Description : subfamily ABCC transporter

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g08560.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00053p00069740	ATMRP14, ABCC10,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00090p00174380	ABCC3, ATMRP3,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AMTR_s00263p00014290	MRP6, ATMRP6,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AT1G30420	ATMRP12, MRP12, ABCC11	multidrug resistance-associated protein 12	0.04	OrthoFinder output from all 47 species
Adi_g007701	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g019667	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g022454	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g12162	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g41924	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g18040	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene05224.t1	ATMRP12, MRP12,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene05228.t1	AtABCC2, ABCC2,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene09680.t1	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene33256.t1	EST3, MRP4,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64199.t1	MRP10, ATMRP10,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0245.g059970	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original...	0.04	OrthoFinder output from all 47 species
Cba_g62779	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.23G078900.1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description:...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000681.7	ABCC1, ATABCC1,...	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Cre08.g369720	ABCC12, MRP13, ATMRP13	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Dac_g31128	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g01770	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g26856	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g02964	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10363	ABCC12, MRP13, ATMRP13	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01016879001	MRP6, ATMRP6, ABCC8	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_12836	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os02g18670.1	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Len_g22379	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Len_g24237	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g04288	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g05737	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g18217	ABCC3, ATMRP3, MRP3	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Mp5g02230.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Msp_g14759	MRP9, ABCC9, ATMRP9	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g18785	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g47149	MRP9, ABCC9, ATMRP9	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g37519	ABCC3, ATMRP3, MRP3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g59892	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g11952	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g27151	MRP11, ABCC13, ATMRP11	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g27594	ATABCC5, MRP5,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001693	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=1-1395	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004099	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: CDS=1-3957	0.04	OrthoFinder output from all 47 species
Smo267218	ATMRP14, ABCC10, MRP14	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo81581	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc12g044810.3.1	MRP6, ATMRP6,...	ABC transporter C family member 8 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Spa_g04417	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g13670	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g20006	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g20529	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g26503	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g45071	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g54061	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g02195	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e026288_P002	MRP10, ATMRP10,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	HCCA
MF	GO:0003678	DNA helicase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	584	716
IPR003439	ABC_transporter-like_ATP-bd	1195	1342
IPR011527	ABC1_TM_dom	861	1113
IPR011527	ABC1_TM_dom	367	507

External Links

No external refs found!

LOC_Os06g08560.1 (MRP11, ABCC13,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation