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  5. LOC_Os06g12250.1

LOC_Os06g12250.1 (SBH2, LOC_Os06g12250)


Aliases : SBH2, LOC_Os06g12250

Description : sphingobase hydroxylase


Gene families : OG0001965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001965_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g12250.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g13366 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Als_g56562 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Aob_g06585 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Ceric.30G041100.1 SBH1, Ceric.30G041100 EC_1.14 oxidoreductase acting on paired donor with... 0.05 OrthoFinder output from all 47 species
Gb_30409 SBH2 sphingobase hydroxylase 0.06 OrthoFinder output from all 47 species
Len_g08569 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
MA_17536g0010 SBH2 sphingobase hydroxylase 0.02 OrthoFinder output from all 47 species
Nbi_g02782 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Nbi_g27124 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Pnu_g01222 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Ppi_g02798 SBH1 EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Smo74254 SBH2 Lipid metabolism.sphingolipid metabolism.sphingobase hydroxylase 0.02 OrthoFinder output from all 47 species
Zm00001e020269_P002 SBH1, Zm00001e020269 sphingobase hydroxylase 0.03 OrthoFinder output from all 47 species
Zm00001e021464_P001 SBH2, Zm00001e021464 sphingobase hydroxylase 0.06 OrthoFinder output from all 47 species
Zm00001e036113_P001 SBH1, Zm00001e036113 sphingobase hydroxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0008610 lipid biosynthetic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 98 234
No external refs found!