LOC_Os06g13600.1 (LOC_Os06g13600)


Aliases : LOC_Os06g13600

Description : TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana (sp|q6npr6|torl3_arath : 166.0)


Gene families : OG0000975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g13600.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00101520 TOR1, CN, SPR2,... Cytoskeleton.microtubular network.microtubule... 0.03 OrthoFinder output from all 47 species
AT1G27210 No alias ARM repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G62580 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g022461 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.04 OrthoFinder output from all 47 species
Adi_g057696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17645 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.04 OrthoFinder output from all 47 species
Aev_g18278 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.04 OrthoFinder output from all 47 species
Aev_g19315 TOR1, CN, SPR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g20996 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ala_g14511 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Ala_g15866 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Als_g09919 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Als_g14078 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.05 OrthoFinder output from all 47 species
Aob_g39727 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.04 OrthoFinder output from all 47 species
Azfi_s0009.g011860 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.04 OrthoFinder output from all 47 species
Dac_g11345 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.06 OrthoFinder output from all 47 species
Dcu_g01963 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.05 OrthoFinder output from all 47 species
Dcu_g16959 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ehy_g01590 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Ehy_g05063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07055 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
GSVIVT01007847001 No alias TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_05823 No alias TORTIFOLIA1-like protein 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Gb_31366 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.02 OrthoFinder output from all 47 species
Len_g03903 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.07 OrthoFinder output from all 47 species
Len_g10402 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.05 OrthoFinder output from all 47 species
Len_g10741 TOR1, CN, SPR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g03452 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.06 OrthoFinder output from all 47 species
Lfl_g11054 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.04 OrthoFinder output from all 47 species
MA_10436002g0010 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.05 OrthoFinder output from all 47 species
MA_10436585g0010 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.03 OrthoFinder output from all 47 species
MA_10436585g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_185230g0010 No alias TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
MA_197466g0010 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.07 OrthoFinder output from all 47 species
MA_8977g0020 No alias TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp3g24000.1 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.04 OrthoFinder output from all 47 species
Msp_g14210 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.07 OrthoFinder output from all 47 species
Nbi_g11697 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Nbi_g12328 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ore_g25634 TOR1, CN, SPR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g09251 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.06 OrthoFinder output from all 47 species
Ppi_g31226 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018881 TOR1, CN, SPR2 not classified & original description: CDS=806-3748 0.05 OrthoFinder output from all 47 species
Sam_g08317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo148739 TOR1, CN, SPR2 Microtubule-associated protein TORTIFOLIA1... 0.04 OrthoFinder output from all 47 species
Smo150575 TOR1, CN, SPR2 Cytoskeleton.microtubular network.microtubule... 0.04 OrthoFinder output from all 47 species
Solyc05g006550.4.1 Solyc05g006550 TORTIFOLIA1-like protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g042580.3.1 Solyc07g042580 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g006350.3.1 TOR1, CN, SPR2,... microtubule growth pause state regulator (SPR2) 0.04 OrthoFinder output from all 47 species
Spa_g01750 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Spa_g17868 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.05 OrthoFinder output from all 47 species
Tin_g13606 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Zm00001e010484_P001 TOR1, CN, SPR2,... microtubule growth pause state regulator (SPR2) 0.04 OrthoFinder output from all 47 species
Zm00001e032814_P001 Zm00001e032814 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e034876_P002 Zm00001e034876 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!