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  5. LOC_Os06g17390.1

LOC_Os06g17390.1 (LOC_Os06g17390)


Aliases : LOC_Os06g17390

Description : rhamnosyltransferase


Gene families : OG0001379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001379_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g17390.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00267640 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT3G02250 No alias O-fucosyltransferase family protein 0.06 OrthoFinder output from all 47 species
AT5G15740 No alias O-fucosyltransferase family protein 0.05 OrthoFinder output from all 47 species
Aev_g18194 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04451 No alias rhamnosyltransferase *(RRT) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g15132 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07066 No alias rhamnosyltransferase *(RRT) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15521 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16331 No alias rhamnosyltransferase *(RRT) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04445 No alias rhamnosyltransferase *(RRT) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g24342 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13428 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G096200.1 Ceric.09G096200 rhamnosyltransferase *(RRT) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g16375 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06369 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06844 No alias rhamnosyltransferase *(RRT) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g15549 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008161001 No alias O-fucosyltransferase 34 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_12518 No alias rhamnosyltransferase 0.03 OrthoFinder output from all 47 species
LOC_Os02g49460.1 LOC_Os02g49460 rhamnosyltransferase 0.04 OrthoFinder output from all 47 species
LOC_Os03g21090.1 LOC_Os03g21090 rhamnosyltransferase 0.05 OrthoFinder output from all 47 species
Len_g05413 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g11916 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18555 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26305 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09258 No alias rhamnosyltransferase *(RRT) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g40298 No alias rhamnosyltransferase *(RRT) & original description: none 0.05 OrthoFinder output from all 47 species
MA_88334g0020 No alias no description available(sp|q93zr8|rrt2_arath : 464.0) 0.03 OrthoFinder output from all 47 species
Msp_g11373 No alias rhamnosyltransferase *(RRT) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g09098 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10954 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29849 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30483 No alias rhamnosyltransferase *(RRT) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g41169 No alias rhamnosyltransferase *(RRT) & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g11742 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14198 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16164 No alias rhamnosyltransferase *(RRT) & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g16723 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02274 No alias rhamnosyltransferase *(RRT) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05889 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020520 No alias rhamnosyltransferase *(RRT) & original description: CDS=407-2056 0.03 OrthoFinder output from all 47 species
Sam_g12263 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16775 No alias rhamnosyltransferase *(RRT) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17003 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Smo110454 No alias O-fucosyltransferase 21 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Smo148957 No alias O-fucosyltransferase 34 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc03g114730.3.1 Solyc03g114730 rhamnosyltransferase 0.04 OrthoFinder output from all 47 species
Solyc06g069380.4.1 Solyc06g069380 rhamnosyltransferase 0.03 OrthoFinder output from all 47 species
Solyc12g038670.2.1 Solyc12g038670 rhamnosyltransferase 0.03 OrthoFinder output from all 47 species
Spa_g06711 No alias rhamnosyltransferase *(RRT) & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g48097 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11044 No alias rhamnosyltransferase *(RRT) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g16519 No alias rhamnosyltransferase *(RRT) & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e001544_P002 Zm00001e001544 rhamnosyltransferase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 110 430
No external refs found!