LOC_Os06g22650.1 (LOC_Os06g22650)


Aliases : LOC_Os06g22650

Description : TOM endomembrane trafficking associated protein


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g22650.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00032430 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00109p00078110 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
AT1G76970 No alias Target of Myb protein 1 0.03 OrthoFinder output from all 47 species
AT4G32760 No alias ENTH/VHS/GAT family protein 0.04 OrthoFinder output from all 47 species
AT5G16880 No alias Target of Myb protein 1 0.07 OrthoFinder output from all 47 species
Adi_g008165 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060027 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080534 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g084192 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51152 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03493 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g030003 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0172.g055713 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.16G081800.1 Ceric.16G081800 ubiquitin adaptor protein *(TOL) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z062500.1 Ceric.1Z062500 ubiquitin adaptor protein *(TOL) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.35G060000.1 Ceric.35G060000 ubiquitin adaptor protein *(TOL) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g00672 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05715 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06382 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014122001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01030233001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
Gb_13955 No alias TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Len_g33770 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10303853g0010 No alias TOM1-like protein 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g05840.1 No alias TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Ore_g16343 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14681 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46320 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16580 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c23_19630V3.1 Pp3c23_19630 ENTH/VHS/GAT family protein 0.02 OrthoFinder output from all 47 species
Ppi_g10775 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32852 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000824 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g07313 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15242 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g15243 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29590 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Smo176673 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
Solyc03g097070.3.1 Solyc03g097070 TOM endomembrane trafficking associated protein 0.06 OrthoFinder output from all 47 species
Solyc04g063280.3.1 Solyc04g063280 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Solyc08g068370.3.1 Solyc08g068370 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Solyc11g005460.2.1 Solyc11g005460 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Spa_g05647 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06704 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11081 No alias ubiquiTin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25340 No alias ubiquiTin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e031902_P001 Zm00001e031902 TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002014 VHS_dom 6 124
IPR004152 GAT_dom 195 269
No external refs found!