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  5. LOC_Os06g23650.1

LOC_Os06g23650.1 (ATCUC2, ANAC098,...)


Aliases : ATCUC2, ANAC098, CUC2, LOC_Os06g23650

Description : transcription factor (NAC)


Gene families : OG0000024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g23650.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00144010 anac057, NAC057,... RNA biosynthesis.transcriptional activation.NAC... 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00058960 anac028, NAC028,... RNA biosynthesis.transcriptional activation.NAC... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00136280 ATCUC2, ANAC098,... RNA biosynthesis.transcriptional activation.NAC... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00163300 ANAC034, LOV1,... RNA biosynthesis.transcriptional activation.NAC... 0.03 OrthoFinder output from all 47 species
AT1G76420 ANAC031, NAC368, CUC3 NAC (No Apical Meristem) domain transcriptional... 0.12 OrthoFinder output from all 47 species
AT1G79580 SMB, ANAC033 NAC (No Apical Meristem) domain transcriptional... 0.03 OrthoFinder output from all 47 species
AT2G18060 VND1, ANAC037 vascular related NAC-domain protein 1 0.03 OrthoFinder output from all 47 species
AT3G15170 ANAC054, ATNAC1, CUC1 NAC (No Apical Meristem) domain transcriptional... 0.07 OrthoFinder output from all 47 species
AT4G10350 ANAC070, BRN2, NAC070 NAC domain containing protein 70 0.04 OrthoFinder output from all 47 species
AT5G39820 NAC094, anac094 NAC domain containing protein 94 0.04 OrthoFinder output from all 47 species
AT5G53950 ATCUC2, ANAC098, CUC2 NAC (No Apical Meristem) domain transcriptional... 0.11 OrthoFinder output from all 47 species
AT5G64060 anac103, NAC103 NAC domain containing protein 103 0.03 OrthoFinder output from all 47 species
Ala_g23922 ANAC070, BRN2, NAC070 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26736 anac057, NAC057 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32078 ANAC018, NAM,... NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g34338 ANAC054, ATNAC1, CUC1 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11744 anac057, NAC057 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39520.t1 ANAC100, ATNAC5,... NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39527.t1 ATCUC2, ANAC098,... NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40679.t1 BRN1, ANAC015,... NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60891.t1 NARS1, NAC2,... NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000074 SMB, ANAC033 NAC-type transcription factor & original description: CDS=9-1136 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007538 SMB, ANAC033 NAC-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010242 NAC053, anac053 NAC-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024257 anac058, NAC058 NAC-type transcription factor & original description: CDS=1-1437 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033753 NARS1, NAC2,... NAC-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0518.g075208 ANAC018, NAM,... NAC-type transcription factor & original description: CDS=70-1221 0.03 OrthoFinder output from all 47 species
Cba_g54999 ANAC070, BRN2, NAC070 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G057300.1 ANAC070, BRN2,... NAC-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.06G022100.1 ANAC039, NAC038,... NAC-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G003000.1 ANAC070, BRN2,... NAC-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.35G028100.1 ANAC100, ATNAC5,... NAC-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g09897 ANAC100, ATNAC5, NAC100 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03638 VND2, NAC076, ANAC076 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11816 ANAC034, LOV1,... NAC-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g07347 ANAC100, ATNAC5, NAC100 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001264001 EMB2749,... RNA biosynthesis.transcriptional activation.NAC... 0.04 OrthoFinder output from all 47 species
GSVIVT01013419001 ANAC031, NAC368, CUC3 RNA biosynthesis.transcriptional activation.NAC... 0.08 OrthoFinder output from all 47 species
GSVIVT01014287001 ATCUC2, ANAC098, CUC2 RNA biosynthesis.transcriptional activation.NAC... 0.05 OrthoFinder output from all 47 species
GSVIVT01018623001 EMB2749,... RNA biosynthesis.transcriptional activation.NAC... 0.03 OrthoFinder output from all 47 species
GSVIVT01023123001 ANAC034, LOV1,... RNA biosynthesis.transcriptional activation.NAC... 0.03 OrthoFinder output from all 47 species
GSVIVT01036071001 ANAC040, NTL8 RNA biosynthesis.transcriptional activation.NAC... 0.03 OrthoFinder output from all 47 species
LOC_Os03g21060.1 ATNAP, NAP,... transcription factor (NAC) 0.02 OrthoFinder output from all 47 species
Len_g09392 ANAC070, BRN2, NAC070 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434250g0010 ANAC034, LOV1,... transcription factor (NAC) 0.02 OrthoFinder output from all 47 species
MA_138461g0010 ANAC070, BRN2, NAC070 transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
MA_16595g0010 ATCUC2, ANAC098, CUC2 transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
MA_21732g0010 ANAC019, NAC019 transcription factor (NAC) 0.05 OrthoFinder output from all 47 species
MA_40991g0010 ANAC100, ATNAC5, NAC100 transcription factor (NAC) 0.02 OrthoFinder output from all 47 species
MA_5017g0010 FEZ, ANAC009 transcription factor (NAC) 0.02 OrthoFinder output from all 47 species
MA_9222g0010 ANAC012, NST3,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Nbi_g01314 NAC053, anac053 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16702 ATCUC2, ANAC098, CUC2 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18464 ATCUC2, ANAC098, CUC2 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31114 ATCUC2, ANAC098, CUC2 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31115 ATCUC2, ANAC098, CUC2 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12924 NAC2, ORE1,... NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28336 NST1, ANAC043, EMB2301 transcriptional regulator *(NST1/NST2) & original... 0.01 OrthoFinder output from all 47 species
Pir_g29103 ATNAP, NAP, ANAC029 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10186 ANAC080,... NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62241 ANAC012, NST3,... NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009445 VND2, NAC076, ANAC076 NAC-type transcription factor & original description: CDS=22-507 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023777 ATCUC2, ANAC098, CUC2 NAC-type transcription factor & original description: CDS=1-732 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0165.g024131 anac057, NAC057 NAC-type transcription factor & original description: CDS=1-1113 0.02 OrthoFinder output from all 47 species
Sam_g23701 No alias NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24165 No alias NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g098190.3.1 anac057, NAC057,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Solyc07g062840.3.1 ATCUC2, ANAC098,... transcription factor (NAC) 0.08 OrthoFinder output from all 47 species
Solyc11g017470.2.1 ANAC002, ATAF1,... transcription factor (NAC) 0.04 OrthoFinder output from all 47 species
Solyc12g056790.2.1 anac017, NAC017,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Spa_g56922 NAC011, ANAC011 NAC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10591 NST1, ANAC043, EMB2301 NAC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003559_P003 ANAC031, NAC368,... transcription factor (NAC) 0.09 OrthoFinder output from all 47 species
Zm00001e018375_P001 ATCUC2, ANAC098,... transcription factor (NAC) 0.12 OrthoFinder output from all 47 species
Zm00001e019017_P002 ANAC034, LOV1,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Zm00001e023108_P001 EMB2749,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Zm00001e029116_P001 ANAC030, VND7,... transcription factor (NAC) 0.03 OrthoFinder output from all 47 species
Zm00001e029404_P001 ATCUC2, ANAC098,... transcription factor (NAC) 0.12 OrthoFinder output from all 47 species
Zm00001e034914_P001 anac057, NAC057,... transcription factor (NAC) 0.04 OrthoFinder output from all 47 species
Zm00001e035277_P002 NARS1, NAC2,... transcription factor (NAC) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR003441 NAC-dom 24 150
No external refs found!