1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g24490.1

LOC_Os06g24490.1 (LOC_Os06g24490)


Aliases : LOC_Os06g24490

Description : Protein DMP4 OS=Arabidopsis thaliana (sp|q8l928|dmp4_arath : 192.0)


Gene families : OG0001459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001459_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g24490.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262790 evm_27.TU.AmTr_v1... Protein DMP9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00255810 DMP2, AtDMP2,... Protein DMP2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G21520 DMP1, AtDMP1 DUF679 domain membrane protein 1 0.04 OrthoFinder output from all 47 species
AT4G24310 No alias Protein of unknown function (DUF679) 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035426 AtDMP7, DMP7 not classified & original description: CDS=1-624 0.03 OrthoFinder output from all 47 species
Dde_g38021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04839 No alias gamete fusion factor (DMP8-9) 0.05 OrthoFinder output from all 47 species
LOC_Os01g29240.1 DMP2, AtDMP2,... Protein DMP5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g29280.1 LOC_Os01g29280 Protein DMP5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os07g45080.1 DMP2, AtDMP2,... Protein DMP2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g22270.1 LOC_Os12g22270 Protein DMP6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g00346 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_12482g0010 No alias Protein DMP6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_45981g0010 No alias Protein DMP4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_9525744g0010 No alias Protein DMP6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g08250.1 No alias Protein DMP5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g11700.1 No alias Protein DMP6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Pir_g32173 DMP2, AtDMP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47548 DMP2, AtDMP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo68629 No alias Protein DMP6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g080490.2.1 DMP2, AtDMP2,... Protein DMP2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e014562_P001 Zm00001e014562 Protein DMP6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e028609_P001 Zm00001e028609 Protein DMP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e029123_P001 Zm00001e029123 Protein DMP3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e036065_P001 Zm00001e036065 Protein DMP5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR007770 DMP 87 248
No external refs found!